Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4814g00016 ATGAATTCCGTACCCAACTTCTTTGTTGCGGTCTTCTCCCTTTGTTTCCTTTCTCTGCTCTTCTCGGGTTTCGCCTCGGAAGCTGAACTACGATCTTTACTTGAATTCAAGAAAGGGATTGAAAGAGATCCGATTGGAAGAGTTTTCGATTCATGGAAGCTGTCTTCGCTCGGCGACCTCAACGACTGTCCTCATTCCTGGGCCGGAGTGGCCTGCGAAGAGGGAACCGGCAACGTCACCGCCGTAGTCCTTGATAGGCTCAGTTTGGGAGGTGAGCTGAAATTGCACACTCTACTGGAACTCAAGATGCTACGGAATCTCAGCCTCTCCGGAAATGACTTTACTGGGCGGCTGCCGCCGGCATTGGGGACGCTGACCACTTTGCAGCATTTGGATCTTTCCGACAACAAGTTCTACGGGCCGATCCCAGCTCGAATTAATGATCTTTGGGCATTAAATTACCTCAATTTGTCTAAGAATAACTTCAAGGGTGGATTTCCGGGAATATATAATCTTCAGCAGCTGAGAGTGCTGGATTTGCGTTCGAATCAGCTTTGGGGTGATATTGGTGACGTATTGTCCGCATTGCGAAATGTGGAGCATCTTGATTTGAGCTCTAATAAGTTCTACGGGGGCCTGTCACTTGGAGCGGAGAATGTTTCTGGCTTGGCGAATACGGTCCATTTTCTAAATTTGAGTTACAACGAGTTAAATGGCCCTTTCTTTGGGGGTGGTTCAATTGCATTGTTCCGTAATTTGCAAGTTTTGGATTTGGGTCACAATCAGATCAGGGGAGAGCTTCCCTCCTTTGGGTCATTGCCGAGTCTTCGAGTTTTGCGACTTGACAGTAATCTGTTATATGGGTCAATACCGGAGGAGTTGTTAGAAACTTCCATGTCATTAGAAGAATTGGATCTTAGCGGCAACGGGTTTACGGGTTCAATTCCTTCAATCAACTCGACATCATTGAATATTTTGAATCTTTCATCAAATGGTTTATCAGGCTCTTTGCCAGCATCTTTGAGAAAATGCACTGTAATGGACATGAGCAGGAATTTGTTACATGGTGATGTATCTGTTATGCAGAACTGGGAAGCCACATTTGAGGTTCTTGACCTGAGTTCAAACAGGCTGTCAGGAAGCTTTCCAAATTTGACAAATCAGTTTGAGGGATTAACCACACTTGCTCTCAGGAATAATTCCTTAGTTGGAGCTTTGCCTCCTAATTTAGGGACTTATTCTAAATTGTCCATGGTTGATTTCAGTTTGAATGAACTTAGTGGCCATATTCCTGTTAGTTTATTTACTTCAACAACATTGATAAGCCTGAATCTTTCTGGAAATCATTTTACCGGGTCAATTCCTCTTGAAAGATCAGGAGCCAGTGAATTAATAATTATGACACCTTATCAGCCGATGGAATATCTTGATTTATCTAATAACTCGTTAAAAGGCATCTTACCTTCTGACATAAGTAGGATGGGTGGGCTCAAACTGTTGAATCTTGCCAGGAATGATTTTTCAGGACAGCTGCCCAATGAATTGAGCAAACTTGTTAATTTGGAGCACCTTGATTTGTCTCACAATAGATTTAAGGGACAAATTCCTGATAAGCTTTCATCCAACTTGAATGTGTTTAATGTGTCCAATAATGATTTATCTGGTGACGTTCCAGTTAATTTGAGGAGGTTTCCTCCTTCATCGTTTCACCCGGGAAATCAAAAGCTGAACTTACCAACGTATATAAATGGTGCTTCAGTGCCTGATAATATTTATGGTCATGGGAAACGTCACAGTTCAAAGGGAAATATCAAGATAGCCATTATTCTTGCTTCAGTTGGTGCTGCTGTGATGATTATTTTTGTTTTCTTGGCTTATCATAGAACACAACTTAAAGAATTTCGTGGCCGAAGTGGGTTCACTGGTCAAAATACTGGAAGGGATATCAAATCAGGAGGATTTGCACGGCCCTCCCTCTTCAAGCTCCACCCAAATGCTCAGCCACCAGCAAGTTCATTGAGCTTTTCAAATGATCACTTGCTGACATCCAATTCAAGATCACTCTCTGGACAGTCGGAGTTTGTAAGTGAAATTACTGAGCATGGCTTAGCTCAGGGAACGGGAGCAGCTAGTTTAGCTTCTGTAAATCCAAATTTGATGGATAATCCTCCCACATCATCTGGAAGGAAGTCATCTCCTGGTTCCCCATTATCTTCTTCCCCTCGTTTTATAGAAACACAAGAAAAACCAGTTATGTTGGATGTGTATTCACCAGATCGCCTGGCTGGAGAGTTGTACTTTCTTGATTCTTCCCTGGCATTCACTGCAGAGGAGTTATCTCGAGCTCCAGCTGAAGTTCTTGGCCGAAGTAGCCATGGTACTTTATACAAAGCTACACTAGACACTGGTCATATGTTGACTGTAAAGTGGTTACGTGTTGGATTGGTCAAACATAAGAAGGAATTTGCCAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCTAACATTGTCCCATTGCGGGCATACTATTGGGGGCCCCGGGAACAAGAGAGGCTTCTTTTAGCTGACTATATACCTGGCGACAGCTTGGCCTTACATCTTTATGAGACAACACCCCGGCGGTACTCGCCATTGTCATTCGGCCAGAGATTAAGAGTTGCCGTTGAAGTTGCCCGATGTCTTTTATACCTTCATGATCGAGGGCTTCCCCATGGAAATTTAAAACCAACAAATATATTATTAGCAGGCCCTGAATACAGTGCACGTCTAACTGACTATGGTCTGCACCGCCTTATGACACCTGCCGGAATTTCAGAGCAGATACTAAATCTCGGAGCACTTGGATACCGTGCTCCAGAACTGGCCTCTGCTAATAAACCAGTCCCATCATTCAAGGCCGATGTGTATGCACTTGGTGTGATCTTAATGGAATTATTAACGAGAAAAAGTGCAGGCGACATAATATCAGGGCAATCCGGGGCTGTTGATCTAACAGATTGGGTCAGGCTCTGTGAGCAAGAAGGACGTGTAATGGACTGTATTGACAGAGACATCGCAGGCGGTGAAGAATCTTCCAGAGAGATGGACGAATTGCTTGCAATATCACTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAATATCAGACAAGTTTTTGACGACCTTTGTTCTATGTCGGCTTGA 3186 0.4363 MNSVPNFFVAVFSLCFLSLLFSGFASEAELRSLLEFKKGIERDPIGRVFDSWKLSSLGDLNDCPHSWAGVACEEGTGNVTAVVLDRLSLGGELKLHTLLELKMLRNLSLSGNDFTGRLPPALGTLTTLQHLDLSDNKFYGPIPARINDLWALNYLNLSKNNFKGGFPGIYNLQQLRVLDLRSNQLWGDIGDVLSALRNVEHLDLSSNKFYGGLSLGAENVSGLANTVHFLNLSYNELNGPFFGGGSIALFRNLQVLDLGHNQIRGELPSFGSLPSLRVLRLDSNLLYGSIPEELLETSMSLEELDLSGNGFTGSIPSINSTSLNILNLSSNGLSGSLPASLRKCTVMDMSRNLLHGDVSVMQNWEATFEVLDLSSNRLSGSFPNLTNQFEGLTTLALRNNSLVGALPPNLGTYSKLSMVDFSLNELSGHIPVSLFTSTTLISLNLSGNHFTGSIPLERSGASELIIMTPYQPMEYLDLSNNSLKGILPSDISRMGGLKLLNLARNDFSGQLPNELSKLVNLEHLDLSHNRFKGQIPDKLSSNLNVFNVSNNDLSGDVPVNLRRFPPSSFHPGNQKLNLPTYINGASVPDNIYGHGKRHSSKGNIKIAIILASVGAAVMIIFVFLAYHRTQLKEFRGRSGFTGQNTGRDIKSGGFARPSLFKLHPNAQPPASSLSFSNDHLLTSNSRSLSGQSEFVSEITEHGLAQGTGAASLASVNPNLMDNPPTSSGRKSSPGSPLSSSPRFIETQEKPVMLDVYSPDRLAGELYFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDTGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLRAYYWGPREQERLLLADYIPGDSLALHLYETTPRRYSPLSFGQRLRVAVEVARCLLYLHDRGLPHGNLKPTNILLAGPEYSARLTDYGLHRLMTPAGISEQILNLGALGYRAPELASANKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEQEGRVMDCIDRDIAGGEESSREMDELLAISLRCILPVNERPNIRQVFDDLCSMSA 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4814g00016 1061 PANTHER OS07G0626500 PROTEIN 9 1059 - -
Pral4814g00016 1061 FunFam Leucine-rich repeat receptor-like protein kinase 766 858 - -
Pral4814g00016 1061 SMART LRR_typ_2 172 196 IPR003591 -
Pral4814g00016 1061 SMART LRR_typ_2 250 272 IPR003591 -
Pral4814g00016 1061 SMART LRR_typ_2 518 542 IPR003591 -
Pral4814g00016 1061 SMART LRR_typ_2 273 297 IPR003591 -
Pral4814g00016 1061 SMART LRR_typ_2 101 125 IPR003591 -
Pral4814g00016 1061 SMART LRR_typ_2 389 413 IPR003591 -
Pral4814g00016 1061 MobiDBLite consensus disorder prediction 713 744 - -
Pral4814g00016 1061 SUPERFAMILY Protein kinase-like (PK-like) 784 1056 IPR011009 -
Pral4814g00016 1061 Gene3D Transferase(Phosphotransferase) domain 1 860 1061 - -
Pral4814g00016 1061 PRINTS Leucine-rich repeat signature 518 531 - -
Pral4814g00016 1061 PRINTS Leucine-rich repeat signature 473 486 - -
Pral4814g00016 1061 ProSiteProfiles Leucine-rich repeat profile. 520 542 IPR001611 GO:0005515
Pral4814g00016 1061 ProSiteProfiles Protein kinase domain profile. 781 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4814g00016 1061 SUPERFAMILY L domain-like 115 558 - -
Pral4814g00016 1061 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 244 466 - -
Pral4814g00016 1061 Pfam Leucine rich repeat 474 531 IPR001611 GO:0005515
Pral4814g00016 1061 Gene3D Ribonuclease Inhibitor 28 148 IPR032675 -
Pral4814g00016 1061 Gene3D Ribonuclease Inhibitor 149 244 IPR032675 -
Pral4814g00016 1061 Pfam Protein kinase domain 785 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4814g00016 1061 Gene3D Ribonuclease Inhibitor 245 581 IPR032675 -
Pral4814g00016 1061 Pfam Leucine Rich repeats (2 copies) 252 290 IPR025875 -
Pral4814g00016 1061 Gene3D Phosphorylase Kinase; domain 1 763 858 - -
Pral4814g00016 1061 Pfam Leucine Rich repeat 298 313 IPR001611 GO:0005515
Pral4814g00016 1061 FunFam Pollen receptor-like kinase 1 859 1061 - -
Pral4814g00016 1061 FunFam Leucine-rich repeat receptor protein kinase EMS1 467 560 - -
Pral4814g00016 1061 ProSiteProfiles Leucine-rich repeat profile. 252 274 IPR001611 GO:0005515
Pral4814g00016 1061 Pfam Leucine rich repeat N-terminal domain 27 72 IPR013210 -
Pral4814g00016 1061 FunFam Nuclear pore complex protein NUP107 26 191 - -
Pral4814g00016 1061 ProSiteProfiles Leucine-rich repeat profile. 300 322 IPR001611 GO:0005515
Pral4814g00016 1061 SMART LRR_sd22_2 125 151 - -
Pral4814g00016 1061 SMART LRR_sd22_2 250 275 - -
Pral4814g00016 1061 SMART LRR_sd22_2 518 545 - -
Pral4814g00016 1061 SMART LRR_sd22_2 172 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4814g00016 Pral-Chr4814 66854 71833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4814g00016 33 1059 Receptor kinase-like Gene Family AT1G55610 26.586 2.15e-60 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4814g00016 Pkinase 6.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4814g00016 - - pcin:129320307 1840.85