Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4814g00008 ATGAATTCAACATCCACACAGTTTGTTTCTACGAGAAGGATGGGTTTATATGATCCTATCCACCAGATTAGCATTTGGGAAGAAAACTTCAAGAATACTTGTAATTTAAGTGCATCTGTGTCTGTGCCCTTAATTGGTGAGGCAGATGTGAAGTTAGATAATCAGTCAGAGGATTCTTCTCATGGAATGCTCGGAATTCCAAGGAATTATGACCAAGAAGCTAATAAGTCTATTGAAAAGATACAAAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTCTGCGGAAAAAGGCTTATGTTCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCAAGTTAGAGCAAGAGCTGGACCGTGCAAGACAGCAGGGATCTTTTATAGGTTGTGGATTGGATTCTGATAATTTGGCATTTGCTGGATCTTCAAATTCGGGAATTGCAACCTTTGAGATGGAGTACGGACACTGGGTAGAAAAACAAAATAGACAAATTTGTGAGCTGAGAAATGCTTTAAATGCTCATACCAGTGACCCAGAGCTCAGAATACTTGTAGATGCTATAATGAATCACTATTCTGACCTTTTCCGCATGAAATCAGCAGCTGCGAAAGTGGATGTTTTCTATGTTTTGTTTGGCATGTGGAAAACAACAGCCGAGCGGTTTTTCTTGTGGATCGGAGGATTCCGCCCATCTGAGCTTCTAAAGGTTATTGTCCCTTTGATCGAACCCTTGACAGAACAACAACGAATGGATGTTTATAACCTAGGACAATCATGCCAGCAAGCAGAGGATGCCCTTTCTCAAGGCAGGGACAGACTTCAGCAAATACTTGCTGAGACTGTCGCAGCTGGACAACTGGTCGACGGAACTTACATTCCTCAGATGGCTAATGCAATGGAGAAGCTGGAAGCTTTGGTGAGCTTTGTGAACCAGGCTGATCATCTTCGGCAGGAAACCTTGCAACAAATGTTCCGAATCCTAACAATTCGTCAGGCAGCTCGGTGCTTGCTTGCTTTAGGGGAATATTTCCAACGCTTGCGGGCTTTGAGCTCCCTTTGGGCTAATCGTCCTTCCGAACCCCCTGCTTAG 1098 0.4372 MNSTSTQFVSTRRMGLYDPIHQISIWEENFKNTCNLSASVSVPLIGEADVKLDNQSEDSSHGMLGIPRNYDQEANKSIEKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIKLEQELDRARQQGSFIGCGLDSDNLAFAGSSNSGIATFEMEYGHWVEKQNRQICELRNALNAHTSDPELRILVDAIMNHYSDLFRMKSAAAKVDVFYVLFGMWKTTAERFFLWIGGFRPSELLKVIVPLIEPLTEQQRMDVYNLGQSCQQAEDALSQGRDRLQQILAETVAAGQLVDGTYIPQMANAMEKLEALVSFVNQADHLRQETLQQMFRILTIRQAARCLLALGEYFQRLRALSSLWANRPSEPPA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4814g00008 365 Coils Coil 262 282 - -
Pral4814g00008 365 FunFam BZIP family transcription factor 79 128 - -
Pral4814g00008 365 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 83 98 IPR004827 GO:0003700|GO:0006355
Pral4814g00008 365 ProSiteProfiles DOG1 domain profile. 149 359 IPR025422 GO:0006351|GO:0043565
Pral4814g00008 365 Pfam Seed dormancy control 166 241 IPR025422 GO:0006351|GO:0043565
Pral4814g00008 365 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 78 120 IPR004827 GO:0003700|GO:0006355
Pral4814g00008 365 Coils Coil 99 126 - -
Pral4814g00008 365 PANTHER TRANSCRIPTION FACTOR TGA9 1 362 - -
Pral4814g00008 365 Pfam bZIP transcription factor 80 110 IPR004827 GO:0003700|GO:0006355
Pral4814g00008 365 Gene3D - 78 128 - -
Pral4814g00008 365 SMART brlzneu 76 147 IPR004827 GO:0003700|GO:0006355
Pral4814g00008 365 SUPERFAMILY Leucine zipper domain 80 115 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4814g00008 Pral-Chr4814 38395 43672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4814g00008 1 363 Calmodulin-binding Proteins AT5G10030 69.041 0.0 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4814g00008 DOG1 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4814g00008 K14431 - gmx:100793353 578.17