Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4814g00005 ATGCAACCATATGACTCTTCACCCCTGGTCTCTCCACCGCCGATCACTGACCCTAGCGAGATCGACCTTGAGGCCGGTCCGAGCGAACAAATTCAATGCCGAATTTGTCTCGAAACAGACGGTAGAGATTTCATAGCTCCTTGCAAGTGCAAGGGCACATCAAAATATGTACATCGAGAGTGTTTGGATCATTGGCGAGCTGTTAAGGAAGGGTTTGCATTTGCTCACTGCACAACCTGCAAGGCTCCTTATCATTTGCGTGTGCATGTTGCCGCTGATAGGAAATGGCGAACCTTGAAGTTTCGATTCTTTGTTACCAGAGACATTTTGTTTATATTTCTGGCTGTCCAGCTTGTCATTACTTCACTTGCTTATTTGGTTTATCTAATAGATGGTTACCAGCAGTATTGGCTTCGTCTTATCTGGGGTTTTGATAGCGAGCTTAGCTTTTACTATATATGTGGAGCACTATTGTTCTTTGCTTTGCTTGGCCTCTCTGGGTGCTTCATTACTTGTTATGATCGAAGGGTTCGCAATGATTTAGCTCAGCCTTGTCGAGAATTATGTCTTTGTTGCTGTCAACCTGGAGTTTGTGCAGACTGTCATTTGCCGGGCACTCTTTGTATGTGGACTGATTGCACCGCATGCTTCGAGAGTTGCGGAACTATGGCTACTGAATGTGGTGGTTGCTTGGGAGGTGCTGGGGAAGCGGGGTTGCCCCTGTTATTCATAATGGCATTGATTGTTCTAGGACTTTTTACTGTAATAGGGATATTTTACAGTGCACTGGTGGCTACTATGGTAGGACAACGGATATGGCAGCGGCATTATCATATCCTTGCAAAAAGGATGCTAACAAAGGAGTATGTGGTTGAGGATGTTGATGACGAGATGGCAGGGTCTGATTGGTCTCCCCCATCTCTCCCACTCGAGCATGTTCAGCAGCTGAAAACACTGGGCCTTCTATGA 969 0.4603 MQPYDSSPLVSPPPITDPSEIDLEAGPSEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDILFIFLAVQLVITSLAYLVYLIDGYQQYWLRLIWGFDSELSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGVCADCHLPGTLCMWTDCTACFESCGTMATECGGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSALVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDDEMAGSDWSPPSLPLEHVQQLKTLGLL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4814g00005 322 MobiDBLite consensus disorder prediction 1 21 - -
Pral4814g00005 322 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 18 321 - -
Pral4814g00005 322 SMART ringv_2 32 81 IPR011016 GO:0008270
Pral4814g00005 322 MobiDBLite consensus disorder prediction 1 15 - -
Pral4814g00005 322 SUPERFAMILY RING/U-box 28 85 - -
Pral4814g00005 322 CDD RING_CH-C4HC3_MARCH 33 81 - -
Pral4814g00005 322 ProSiteProfiles Zinc finger RING-CH-type profile. 25 87 IPR011016 GO:0008270
Pral4814g00005 322 Pfam RING-variant domain 33 80 IPR011016 GO:0008270
Pral4814g00005 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 95 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4814g00005 Pral-Chr4814 25725 29409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4814g00005 7 322 C3H Transcription Factor Family AT2G22120 86.120 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4814g00005 - - gmx:100791777 629.402