Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4814g00002 ATGAAAGCTCTCTCAGATTTCTTCTTTCATCTCTACGCAAAGACCGTCGTCCTGCTGGTCTTCCTGCTTATAGAATTCATCATCCTCATTCGAAAACTCAAAACACACACCCCTCCAATTACCATCTCCCAGTACCTCCAACTCATTGAAGAGAAAAGCCCCACCGTTTGTTTCACCAGAACACTGAATATGGCGGACCAACTAGAGTGCAGGGTTTGCTTATCTGAGCTTCGAGAAGGCGAAAATGTCAGGAACTTGAAATGTAAACACACATTTCACAAGGAATGCTTGGACCGATGGTTGCTTCAGTTTTGGGCCACTTGTCCTCTCTGTAGGAACAGAGTCCTTCCAGAAGATGTCGTGACCAGTTATCGACGGCTTCGGAATCAGAGGGAATTGATCATCTTTCCCTTCTGGGATTCCTCGGAAGATTAG 435 0.4575 MKALSDFFFHLYAKTVVLLVFLLIEFIILIRKLKTHTPPITISQYLQLIEEKSPTVCFTRTLNMADQLECRVCLSELREGENVRNLKCKHTFHKECLDRWLLQFWATCPLCRNRVLPEDVVTSYRRLRNQRELIIFPFWDSSED 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4814g00002 144 ProSiteProfiles Zinc finger RING-type profile. 70 112 IPR001841 -
Pral4814g00002 144 SUPERFAMILY RING/U-box 56 118 - -
Pral4814g00002 144 SMART ring_2 70 111 IPR001841 -
Pral4814g00002 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 119 IPR013083 -
Pral4814g00002 144 PANTHER - 1 131 - -
Pral4814g00002 144 Pfam Ring finger domain 69 112 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4814g00002 Pral-Chr4814 8472 9121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4814g00002 69 126 C3H Transcription Factor Family AT1G15100 55.172 5.42e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4814g00002 K16282 - gmx:102669811 160.999