Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4813g00001 ATGATCACTTTGTGTCGAACATCATTGCAGGATATGTTTGCTGGTGGAACCGACACTTCGGCAACAGTACTAGAATGGGCCATGTCAGAAATGATGAAAAATCCTAGAGTGATGGAAAAGGCGCAAGCTGAGGTTAGAAACGTTTTCAAGGGGAAGAAAGTAATTCGTGATAGTGATATGATTCAACTCAGTTACTTAAAACTAGTAATCAAAGAAACTTTGAGGCTGTACCCGCCCGTTCCTTTGTTGGTTCCAAGAGAATGTAGAGAAACCTGCAAGATTAATGGTTATGAAATACCCATCAAAACTCAAATTATAATAAATGCATGGGCACTTGGAAGAGATCCAAATTACTGGTATGATGCAGAGAGATTCATACCAGAGAGGTTCCAAGGCAATAATTCTGATATTGATTTCAAAGGAACAAACTTTGAGTACGTCCCTTTCGGAGCAGGAAGAAGAATGTGTCCAGGCATTTCATTTGGCTTAGCAAGCGTTGAGCTTCCTCTTGCTAGCTTACTCTATCACTTCGATTGGAAACTCCCACATGGAATGGATCCTGCAGATTTAGATATGACTCCAGATTATGGTATCACAAATAGAAGGAAGGACAATTTGTGTTTGATTCCCACGCCATATAATATCGATTCTGTTGTTGGCAGTTCCTAG 669 0.4021 MITLCRTSLQDMFAGGTDTSATVLEWAMSEMMKNPRVMEKAQAEVRNVFKGKKVIRDSDMIQLSYLKLVIKETLRLYPPVPLLVPRECRETCKINGYEIPIKTQIIINAWALGRDPNYWYDAERFIPERFQGNNSDIDFKGTNFEYVPFGAGRRMCPGISFGLASVELPLASLLYHFDWKLPHGMDPADLDMTPDYGITNRRKDNLCLIPTPYNIDSVVGSS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4813g00001 222 FunFam Predicted protein 13 208 - -
Pral4813g00001 222 Pfam Cytochrome P450 7 202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 Gene3D Cytochrome P450 2 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS E-class P450 group I signature 24 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS E-class P450 group I signature 108 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS E-class P450 group I signature 4 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS E-class P450 group I signature 156 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS E-class P450 group I signature 67 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS E-class P450 group I signature 146 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS P450 superfamily signature 15 32 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS P450 superfamily signature 156 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS P450 superfamily signature 68 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 PRINTS P450 superfamily signature 147 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4813g00001 222 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 149 158 IPR017972 GO:0005506|GO:0016705
Pral4813g00001 222 PANTHER OS08G0105600 PROTEIN 10 214 - -
Pral4813g00001 222 SUPERFAMILY Cytochrome P450 8 212 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4813g00001 Pral-Chr4813 27160 28000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4813g00001 6 213 Cytochrome P450 AT3G26330 53.365 2.49e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4813g00001 - - gmx:100794503 319.316