Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4808g00080 ATGAGATCAAACATGAACTTCAAGGGCTACGAGGATACCAACAACCCCAATTCCATCGGCAATAATGGAAGCAGGCCGCCTGCAAATCTCTTGAGGCAACCTTCAATATACTCCCTCACTTTTGACGAGTTTCAGAGCACTATAGGTGGCCTTGGAAAGGACTTCGGCTCAATGAACATGGATGAACTCTTGAAGAACATATGGACAGCCGAAGAGACTCAATCACTAGCAATGTCATCTTCAGCTAACGGAGGAGAAAGTAGTAAAAACAACATCACCATCGTCAACAACAACAACAATTATTATAGTAATCCTAATGGTAATTTGCAGAAACAAGGGTCACTTACTTTGCCAAGGACTCTTAGTCAAAAGACTGTTGATGAGGTTTGGAGGGACTTGATGAGAGACAGTAGTGGGGGTAACAGTACGAAAGTTAATAGTGGTGGGGTTGTTCCTTCCGCTTCTGCCATGCCTCAGAGGCAACCAACTTTAGGTGAAATAACATTAGAGGAATTCTTGGTAAGAGCAGGGGTTGTGAGAGAGGACAATAATAATGTGCCTCTTCAAACTGGAAGACATCAATGGTTCAATAACGACAACGCTGGCTTAATGCTGGGGTTTCAGCAGCCAAACGGGAACTTGGGAAATGCTAACCCGATGGTGAATAGCAATAATCCAGTTTCCAAACAACCTCCCACTGTGTCATTGCAGGTAGGTAGTGGTACTGGTACTCATACACAACACCAGCAGCCACCGCTTTTCCCCAAACCGGTGAATGTGGCTTTTGCGGCGGCGGCGGCGGCTCCGATGCATTTGGTGAATAATTCTCAGATTGACGGGAGGGGAGGGATGATGGGGGTTCATCAGGGAGGTGGTTTGACGGTGGCGGGGTCTCCGAGGAGTCAGATATCGCCTCCGGCGGAGGGTGTGACAAGGAGCAAGGGGGATCCGTTGTTGCAATCGCCAGTACCGTATGTGATTAACAGGCCCAGGAAGTGCAGTGCGCTAGAGAAAGTGGTGGAGAGGAGGCAGAGGAGGATGATTAAGAACAGAGAATCGGCTGCCAGGTCTCGGGCTCGCAAGCAGGCCTATACTTTAGAACTGGAAGCTGAAGTCGAGAAACTCAAGGATTTGAACCGAGAGCTAAAACGAAAGCAGGCTAAATTTATGGAAATGCAGAAGAATAATAGCCAGGCTTTGGTGACGCTGAACGGGGCAGGGGGAGGCAAAAGACAGTGCTTGAGAAGGACACTTACAGGACCATGGTAG 1269 0.4823 MRSNMNFKGYEDTNNPNSIGNNGSRPPANLLRQPSIYSLTFDEFQSTIGGLGKDFGSMNMDELLKNIWTAEETQSLAMSSSANGGESSKNNITIVNNNNNYYSNPNGNLQKQGSLTLPRTLSQKTVDEVWRDLMRDSSGGNSTKVNSGGVVPSASAMPQRQPTLGEITLEEFLVRAGVVREDNNNVPLQTGRHQWFNNDNAGLMLGFQQPNGNLGNANPMVNSNNPVSKQPPTVSLQVGSGTGTHTQHQQPPLFPKPVNVAFAAAAAAPMHLVNNSQIDGRGGMMGVHQGGGLTVAGSPRSQISPPAEGVTRSKGDPLLQSPVPYVINRPRKCSALEKVVERRQRRMIKNRESAARSRARKQAYTLELEAEVEKLKDLNRELKRKQAKFMEMQKNNSQALVTLNGAGGGKRQCLRRTLTGPW 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4808g00080 422 CDD bZIP_plant_BZIP46 342 394 - -
Pral4808g00080 422 SMART brlzneu 338 405 IPR004827 GO:0003700|GO:0006355
Pral4808g00080 422 Pfam bZIP transcription factor 342 393 IPR004827 GO:0003700|GO:0006355
Pral4808g00080 422 Coils Coil 361 395 - -
Pral4808g00080 422 SUPERFAMILY Leucine zipper domain 342 391 IPR046347 GO:0003700|GO:0006355
Pral4808g00080 422 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 345 360 IPR004827 GO:0003700|GO:0006355
Pral4808g00080 422 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 340 397 - -
Pral4808g00080 422 MobiDBLite consensus disorder prediction 135 158 - -
Pral4808g00080 422 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 32 422 IPR043452 GO:0003700|GO:0045893
Pral4808g00080 422 MobiDBLite consensus disorder prediction 136 158 - -
Pral4808g00080 422 MobiDBLite consensus disorder prediction 298 317 - -
Pral4808g00080 422 MobiDBLite consensus disorder prediction 96 117 - -
Pral4808g00080 422 Gene3D - 340 397 - -
Pral4808g00080 422 MobiDBLite consensus disorder prediction 1 30 - -
Pral4808g00080 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 340 385 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4808g00080 Pral-Chr4808 519726 523818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4808g00080 22 422 bZIP Transcription Factor Family AT1G49720 46.556 1.43e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4808g00080 bZIP_1 2.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4808g00080 K14432 - jre:108988934 390.578