Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4808g00069 | ATGAGGTCCTACTGTCATTGTCTGAGTGCCCAACTGTTGCCCTTGTCTCGTAGTGAGATTCTGCTGGAGTCAGTGCAAAGGATTGGCTTCGTCAAAACAGTGACACGGCGTATCTTACTTGAGTTCCATAACGCCCCCTTCAACCCCGTGTGCGAATTGTGTACACAGCTGGCACTTCCCTGCCACGTCACCCCCAAACCGTATATATGCCCCTCGCTCCTTTCCCCTCCTCCTAGCTTGGTAGCTTCTCCGCATTCACAATCAGCCGTCATTCTTATCCTCTCTCACTTTTCGCACTCTTTCACTCCTCTCCGGCTCTCCCCCATGTCCTCCAACACCCCATCCAGGCTCCTTCCCCCCTCCTCTTCCTCTTCCTCCTCCTCCTCCGCCTCCTTCTCTTTTCGTCCGCCCACCGCCCTCCCTCCCGACCAAGAACTCTCCGTCATCGTCGAAGCACTCACGAACGTCGTCCTTGGCTCCACCGCTGATCTCACCCATCGCTTCCCCTCACCCTATTCCTCTTCCGCAGCCGGAATCCTACACAATGTCGACCACGGGGCGCCAGCCCTGACGACTGCTGAAGCAGGCCGCCCTGATTTCGGAGTGGCCTCCTGCTCGGGCTCCAAGTCTTTACCAGAAGAGAAGACCAAGAATGCAGGGAACAAACAGCCGCAGAAGGGGGGGGCGAAGAAGTACAGGGGAGTGAGGCAGAGGCCCTGGGGCAAATGGGCGGCTGAGATTCGAGATCCGAGACGGGCGACCCGGGTGTGGCTGGGAACCTTCAAGACAGCCGAGGAAGCAGCTCACGCTTACGACAAAGCGGCCATCGAGTTCCGCGGGCCCCGCGCCAAGCTGAACTTTCCTTTCTCTGATGACTCGTTGCTGAATTTGCAGGCCACTCAGCCACCGGAAGCTCCCCCATTGGCTCAGCCGCCGGCGACAGTGCCGTCCGAGGCGGAGCCGGTGAATCCCGAGAATCCGAACATTGAAATGGAAGCGATAGTGCCCGACGATGGTGAATTCTGGGATGGGATTGGAAAAGAAGATTTGGAATGGTTGATGGATTTTGTCGAGGGAGACTCTTCGGACTCTGCTCCCGGAACTACTCAGAGCCGGTGA | 1119 | 0.5773 | MRSYCHCLSAQLLPLSRSEILLESVQRIGFVKTVTRRILLEFHNAPFNPVCELCTQLALPCHVTPKPYICPSLLSPPPSLVASPHSQSAVILILSHFSHSFTPLRLSPMSSNTPSRLLPPSSSSSSSSSASFSFRPPTALPPDQELSVIVEALTNVVLGSTADLTHRFPSPYSSSAAGILHNVDHGAPALTTAEAGRPDFGVASCSGSKSLPEEKTKNAGNKQPQKGGAKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFKTAEEAAHAYDKAAIEFRGPRAKLNFPFSDDSLLNLQATQPPEAPPLAQPPATVPSEAEPVNPENPNIEMEAIVPDDGEFWDGIGKEDLEWLMDFVEGDSSDSAPGTTQSR | 372 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4808g00069 | 372 | MobiDBLite | consensus disorder prediction | 191 | 235 | - | - | |
Pral4808g00069 | 372 | MobiDBLite | consensus disorder prediction | 112 | 135 | - | - | |
Pral4808g00069 | 372 | PANTHER | DNA-BINDING DOMAIN | 197 | 309 | IPR044808 | GO:0003700|GO:0009873 | |
Pral4808g00069 | 372 | SMART | rav1_2 | 231 | 294 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4808g00069 | 372 | MobiDBLite | consensus disorder prediction | 304 | 318 | - | - | |
Pral4808g00069 | 372 | SUPERFAMILY | DNA-binding domain | 231 | 290 | IPR016177 | GO:0003677 | |
Pral4808g00069 | 372 | MobiDBLite | consensus disorder prediction | 112 | 137 | - | - | |
Pral4808g00069 | 372 | Gene3D | AP2/ERF domain | 230 | 289 | IPR036955 | GO:0003700|GO:0006355 | |
Pral4808g00069 | 372 | FunFam | Ethylene-responsive transcription factor 2 | 230 | 289 | - | - | |
Pral4808g00069 | 372 | ProSiteProfiles | AP2/ERF domain profile. | 231 | 288 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4808g00069 | 372 | MobiDBLite | consensus disorder prediction | 299 | 326 | - | - | |
Pral4808g00069 | 372 | CDD | AP2 | 230 | 288 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4808g00069 | 372 | PRINTS | Ethylene responsive element binding protein signature | 254 | 270 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4808g00069 | 372 | PRINTS | Ethylene responsive element binding protein signature | 232 | 243 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4808g00069 | 372 | Pfam | AP2 domain | 231 | 280 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4808g00069 | Pral-Chr4808 | 462830 | 464232 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4808g00069 | 230 | 288 | AP2-EREBP Transcription Factor Family | AT2G33710 | 83.051 | 2.78e-29 | 111 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral4808g00069 | AP2 | 6e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4808g00069 | - | - | pcin:129285371 | 328.176 |