Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4808g00004 ATGCCCGACAGTGCAAGAGATAGACCGTCGTGTGTGTCGTCAGATGAAGGCCATGGCATTGATGACACTAACAGCAATGAATATTTTATTAAGAAGCAGCGAAGCAATTCGATGCTTGCTAATGGTGATGCTGCTGAGAAGGAGGCTACTGATACTGAAAACTGGAATCCTGATCATGTGAATAGAGATTCTGCATTGGAGGCTGTTGCCGTTAATTCTGCTGAACTGAAGGCCAACTTGCGAAGCAATGTAACTGAGGCTAAGCCCCAACTTTCTAAGCTGGAAGAGGACGAAATAAGAAGAGAAAGAAAAAGACAGTTAAACAGGGAATCAGCGCGAAGATCAAGAATACGCAAGCAGCAAGAACTTGAAGAACTACAAAATACTGTGGACAATCTTATCCGCGAAAATTCCGCACTGAAGCGAAAGCTAATGAGACTTTCCGAGGATTGTATGGAGCTCTCTGGTTCAAACGACTCCATTGAGAGAGGTCTCATTGAGGAGTATGGACCAGAAATGATTGCCGATCTTGTGGCCACCAAGCCAGGTAGAATCACTTCTGAAGTAAGCCCAAAGATAGTGAAGGAAGCAGCCGATCAAAATCCATCAATTGAAGTTACCGGCCAGTGTTAA 633 0.4439 MPDSARDRPSCVSSDEGHGIDDTNSNEYFIKKQRSNSMLANGDAAEKEATDTENWNPDHVNRDSALEAVAVNSAELKANLRSNVTEAKPQLSKLEEDEIRRERKRQLNRESARRSRIRKQQELEELQNTVDNLIRENSALKRKLMRLSEDCMELSGSNDSIERGLIEEYGPEMIADLVATKPGRITSEVSPKIVKEAADQNPSIEVTGQC 210
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4808g00004 210 SUPERFAMILY Leucine zipper domain 99 154 IPR046347 GO:0003700|GO:0006355
Pral4808g00004 210 Gene3D - 95 157 - -
Pral4808g00004 210 Coils Coil 109 150 - -
Pral4808g00004 210 SMART brlzneu 96 160 IPR004827 GO:0003700|GO:0006355
Pral4808g00004 210 CDD bZIP_plant_GBF1 101 152 IPR045314 GO:0003700|GO:0006355
Pral4808g00004 210 MobiDBLite consensus disorder prediction 1 60 - -
Pral4808g00004 210 MobiDBLite consensus disorder prediction 1 28 - -
Pral4808g00004 210 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 98 154 IPR004827 GO:0003700|GO:0006355
Pral4808g00004 210 MobiDBLite consensus disorder prediction 46 60 - -
Pral4808g00004 210 Pfam bZIP transcription factor 96 155 IPR004827 GO:0003700|GO:0006355
Pral4808g00004 210 PANTHER G-BOX-BINDING FACTOR 3-RELATED 26 181 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4808g00004 Pral-Chr4808 37897 41843 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4808g00004 95 177 bZIP Transcription Factor Family AT4G36730 46.988 1.93e-16 74.3
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4808g00004 bZIP_1 1.2e-13 CL0018
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4808g00004 K09060 - gmx:102665715 117.087