Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4808g00004 | ATGCCCGACAGTGCAAGAGATAGACCGTCGTGTGTGTCGTCAGATGAAGGCCATGGCATTGATGACACTAACAGCAATGAATATTTTATTAAGAAGCAGCGAAGCAATTCGATGCTTGCTAATGGTGATGCTGCTGAGAAGGAGGCTACTGATACTGAAAACTGGAATCCTGATCATGTGAATAGAGATTCTGCATTGGAGGCTGTTGCCGTTAATTCTGCTGAACTGAAGGCCAACTTGCGAAGCAATGTAACTGAGGCTAAGCCCCAACTTTCTAAGCTGGAAGAGGACGAAATAAGAAGAGAAAGAAAAAGACAGTTAAACAGGGAATCAGCGCGAAGATCAAGAATACGCAAGCAGCAAGAACTTGAAGAACTACAAAATACTGTGGACAATCTTATCCGCGAAAATTCCGCACTGAAGCGAAAGCTAATGAGACTTTCCGAGGATTGTATGGAGCTCTCTGGTTCAAACGACTCCATTGAGAGAGGTCTCATTGAGGAGTATGGACCAGAAATGATTGCCGATCTTGTGGCCACCAAGCCAGGTAGAATCACTTCTGAAGTAAGCCCAAAGATAGTGAAGGAAGCAGCCGATCAAAATCCATCAATTGAAGTTACCGGCCAGTGTTAA | 633 | 0.4439 | MPDSARDRPSCVSSDEGHGIDDTNSNEYFIKKQRSNSMLANGDAAEKEATDTENWNPDHVNRDSALEAVAVNSAELKANLRSNVTEAKPQLSKLEEDEIRRERKRQLNRESARRSRIRKQQELEELQNTVDNLIRENSALKRKLMRLSEDCMELSGSNDSIERGLIEEYGPEMIADLVATKPGRITSEVSPKIVKEAADQNPSIEVTGQC | 210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4808g00004 | 210 | SUPERFAMILY | Leucine zipper domain | 99 | 154 | IPR046347 | GO:0003700|GO:0006355 | |
Pral4808g00004 | 210 | Gene3D | - | 95 | 157 | - | - | |
Pral4808g00004 | 210 | Coils | Coil | 109 | 150 | - | - | |
Pral4808g00004 | 210 | SMART | brlzneu | 96 | 160 | IPR004827 | GO:0003700|GO:0006355 | |
Pral4808g00004 | 210 | CDD | bZIP_plant_GBF1 | 101 | 152 | IPR045314 | GO:0003700|GO:0006355 | |
Pral4808g00004 | 210 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Pral4808g00004 | 210 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Pral4808g00004 | 210 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 98 | 154 | IPR004827 | GO:0003700|GO:0006355 | |
Pral4808g00004 | 210 | MobiDBLite | consensus disorder prediction | 46 | 60 | - | - | |
Pral4808g00004 | 210 | Pfam | bZIP transcription factor | 96 | 155 | IPR004827 | GO:0003700|GO:0006355 | |
Pral4808g00004 | 210 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 26 | 181 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4808g00004 | Pral-Chr4808 | 37897 | 41843 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4808g00004 | 95 | 177 | bZIP Transcription Factor Family | AT4G36730 | 46.988 | 1.93e-16 | 74.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Pral4808g00004 | bZIP_1 | 1.2e-13 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4808g00004 | K09060 | - | gmx:102665715 | 117.087 |