Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4805g00014 ATGGCCTCCGACGACTCTTCCGGTCATGGTCTTCCTCAGCTCTCTAAGAAAACTCCATTTCTGGGTCTGAAGCTTTACTTCGTGATCGGCATTCTCCTTCTAATCGTGCTTGTAATTTTGCTTCTGGTCTTTCTGTGCCTTCGTCGGAATCGTAACTCGACGAAGCGTAAAATGCGCGTGAAGCACAGTTCGGGGATGATTCCCTTGGTCTCCAAAGAGATCGTGGAAGTCAAAGCCTTGGATCTCGAGCAGAATTGTGAGCAGGCAGAGATTAAAATCGAGGATGAGGATCCGAAGAAGGAGAAGGTTGAGATTGAGGTTGAGAGAAGAGGGAAGAAGACGAGCGACGAGAGTGATGTGTCCGGCGGGAGTCGCAGTGACGTGTCGGTGGACGCACCGAACATAGGGTGGGGCCGATGGTATAGCTTGAGGGAGCTGGAGGATGCGACACGTGCGTTTGCGGAAGAAAGTGTGATCGGTGAAGGGGGGTATGGTATTGTGTACAAAGGAGTTCTTGAAGATGGGTCGGTGGTGGCTGTGAAGAATCTTCTGAACAACAAAGGTCAAGCGGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTAAGGCATAAGAATTTGGTGGGTTTAGTCGGATATTGCGCTGAAGGTCCTCAAAGGATGCTTGTTTATGAGTATGTTGATAATGGAAATTTGGAGCAGTGGTTGCATGGTGACGTTGGGCCTGTTAGTCCCTTGACATGGGATATAAGGATGAAAATCGCCATTGGGACCGCAAAAGGGCTGGCCTATCTGCATGAAGGGTTAGAACCCAAAGTGGTGCACCGGGATGTAAAATCCAGTAACATTCTTTTGGACAGAAAGTGGAATGCTAAAGTATCAGACTTTGGACTAGCCAAGTTATTAGGCTCTGAGAAGACCCATGTGACCACACGTGTAATGGGGACATTTGGATACGTTTCACCTGAGTATGCAAGCACGGGAATGCTTAATGAGGGAAGTGATGTGTATAGCTTTGGAGTTCTACTCATGGAGATAATTACAGGAAGAAGTCCCATAGATTATTCTAGACCACCTGGAGAGATGAATTTGATCGATTGGTTCAAGGGAATGGTAGCAAGTCGTCGTGGTGAAGAGCTGGTAGATCCTTTGATTGAGGTTCAGCCCTCTCCAAGATCTTTGAAACGAGCTTTGCTGGTTTGCCTGCGCTGTGTAGATTTGGACGTCAGTAAACGACCGAAGATGGGTCAAATCGTTCATATGCTTGAGGCAGATGATTTCCCCTTTCGTTCTGAACTTCGTACAATAAGAGAGAAAGAGCCCGTTGCTTCTTCGCATTCCACAATTCCCCGTAAAGTTCAATATCCCCCCAAGAATGTGGATTCTATAGAACAGTCAAGATGGAGATGA 1416 0.4718 MASDDSSGHGLPQLSKKTPFLGLKLYFVIGILLLIVLVILLLVFLCLRRNRNSTKRKMRVKHSSGMIPLVSKEIVEVKALDLEQNCEQAEIKIEDEDPKKEKVEIEVERRGKKTSDESDVSGGSRSDVSVDAPNIGWGRWYSLRELEDATRAFAEESVIGEGGYGIVYKGVLEDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLIDWFKGMVASRRGEELVDPLIEVQPSPRSLKRALLVCLRCVDLDVSKRPKMGQIVHMLEADDFPFRSELRTIREKEPVASSHSTIPRKVQYPPKNVDSIEQSRWR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4805g00014 471 SMART serkin_6 153 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4805g00014 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Pral4805g00014 471 MobiDBLite consensus disorder prediction 102 120 - -
Pral4805g00014 471 CDD STKc_IRAK 159 425 - -
Pral4805g00014 471 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Pral4805g00014 471 PANTHER OS01G0323000 PROTEIN 13 446 - -
Pral4805g00014 471 ProSiteProfiles Protein kinase domain profile. 153 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4805g00014 471 Pfam Protein kinase domain 154 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4805g00014 471 Gene3D Transferase(Phosphotransferase) domain 1 229 435 - -
Pral4805g00014 471 Coils Coil 72 92 - -
Pral4805g00014 471 SUPERFAMILY Protein kinase-like (PK-like) 127 425 IPR011009 -
Pral4805g00014 471 Gene3D Phosphorylase Kinase; domain 1 129 228 - -
Pral4805g00014 471 MobiDBLite consensus disorder prediction 441 471 - -
Pral4805g00014 471 FunFam Probable serine/threonine-protein kinase At1g01540 133 228 - -
Pral4805g00014 471 MobiDBLite consensus disorder prediction 102 127 - -
Pral4805g00014 471 FunFam Putative receptor-like serine/threonine-protein kinase 229 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4805g00014 Pral-Chr4805 78707 82877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4805g00014 86 425 Receptor kinase-like Gene Family AT4G02010 45.349 4.65e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pral4805g00014 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4805g00014 - - jre:109011190 682.945