Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4805g00006 ATGCTTTCATGTCAAAGATACCAGTTTCGCTCTCCATGCTCTCTCCCTCTCCAGTCCCTCTCCACCCCAACTTTCACCGTTGTCAACTGCCAAAATCCACATGGCCCAGATACCCAGAACTTCATTCTCCGCCAGCAGAACTCCAAATCCACCGCCTTTCTCCTTCACCAACTATCTCCCGACCGAGAAAACCATCATTCCCAGCCATTCAATCTCAAATCCGGTGACCTTCAACACAACATGCCGGATGAAGAAAAGATTAAGCTTTTAGAGCTTTCCCTTGTAAGGAGAAGAACCCCTCAGTTTCCTGGGTCTATCTATGTTCAATCTCCTAGTGATCCTGATGTGGGTTCTTCTTTGCCGCCTCTGCGAACTCTGTTTAGAGAAAAAGTGGAAGATGAAGATGCAGACGAGGAGGAGATAATAATGCGTGCGATTGAGATTCGAAGGAAGGTGACGCGAGAGATTTTTTTGGAAGCTATGAGAAAGGGCAAGTTTGGAATCACGTACGCTACCAATTTGGTCAATCGATTGACTGGTTTTATCGATTACGTCATGATTGAAGCCGCTTCGATGAAACGAATACCTCAGTATTCGCATTCTACTTTCAATTTACGCGCCAAAACTGTCATAGACGACTTACAAGTTGTGCCTCTTATCAGATGGTTGAAGCATAATGCACTGTCATATCATCGGATATCCAAGCTCATTTTGATGTCAAGAGGAAACCTTGAGTCTATAAGACGTCTTGCTGAGTGGTTGAAGTCAGTAAAGGTGAAAGGAGAATTTCTCGGGGTTACACTTGTGAATGCTGGAGATAATATTCTTGATCGCAGCAATGGGGAACTGGATGGGATTGTAGAGTATTTAGAGAGCAAGGGAGTCAGGAGGGATTGGATGGGTTATGTGATAAGTCGCTGTCCTCAACTGCTATCTTACAGCATGGAAGAAGTAGAGACTCGTGTGAAATTCTACTTAGATATGGGCTTAAATAATCATGATTTTGGCACAATGGTTTTTGATTATCCTAAAGCTCTTGGTTACTATACTCTAGAAGAAATGAATCAGAAGGTTAATTACTTGAAGGAGTTTGGGCTCAAAAGTGAGGATGTTGGCAGATTGTTAGCATTTAAGCCTCATTTGATGGGATGTAGCATTGAAGAAGGATGGAAGCCTCTTGCTAAGTACTTGTATTATTATGGGGTCACCCGAGATGGTATGAGGAGAATGCTTATGATCAAACCAATGGTTTTTTGTATTGATTTGCAGACAAATATTGTGCCCAAGGTAAAGTTTTTTCAGGATATAGGGATTCGAGATGATGCAATCGGAAACATGCTTGTGAAGTTTCCTACTCTGCTCACATACAGCCTCTACAAGAAGATTAGGCCAGTGGTCATATTCTTGATGACCAAAGCTGGGGTCAGCGATGAAGATATCGCAAAGGCTATTGCTCTGGGACCTGAGCTCTTGGGATGCAGCATAACGCATAAGCTTGAAGTGAATGTAAAATATTATCTGTCACTTGGTATACGGCTTAAGCAACTGGGTGAGATGATTGCGGATTTCCCAATGCTGCTCAGATACAACATAGATATCCTTCGTCCCAAGTATAGTTATTTGCGGCGAACCATGGTCCGGCCTTTGGAAGAGCTCATCGAGTTTCCAAGGTTTTTCAGTTATTCTCTGAATGGTCGAATTATTCCAAGGCACAAGGTTCTGGTGGAAAATCGGATTAATTTGAAGCTGCGTTACATGTTGGCTTGTTCTGATGAAGAATTCAGGAAATTGGTTGACTCTAAAATTAGAAAGCGACAAACACTGCTATCTGCAGACACGATTGCTGATGTTACGGAACCTCACAGATGA 1869 0.4275 MLSCQRYQFRSPCSLPLQSLSTPTFTVVNCQNPHGPDTQNFILRQQNSKSTAFLLHQLSPDRENHHSQPFNLKSGDLQHNMPDEEKIKLLELSLVRRRTPQFPGSIYVQSPSDPDVGSSLPPLRTLFREKVEDEDADEEEIIMRAIEIRRKVTREIFLEAMRKGKFGITYATNLVNRLTGFIDYVMIEAASMKRIPQYSHSTFNLRAKTVIDDLQVVPLIRWLKHNALSYHRISKLILMSRGNLESIRRLAEWLKSVKVKGEFLGVTLVNAGDNILDRSNGELDGIVEYLESKGVRRDWMGYVISRCPQLLSYSMEEVETRVKFYLDMGLNNHDFGTMVFDYPKALGYYTLEEMNQKVNYLKEFGLKSEDVGRLLAFKPHLMGCSIEEGWKPLAKYLYYYGVTRDGMRRMLMIKPMVFCIDLQTNIVPKVKFFQDIGIRDDAIGNMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVSDEDIAKAIALGPELLGCSITHKLEVNVKYYLSLGIRLKQLGEMIADFPMLLRYNIDILRPKYSYLRRTMVRPLEELIEFPRFFSYSLNGRIIPRHKVLVENRINLKLRYMLACSDEEFRKLVDSKIRKRQTLLSADTIADVTEPHR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4805g00006 622 SMART mt_12 408 439 IPR003690 GO:0003690|GO:0006355
Pral4805g00006 622 SMART mt_12 301 331 IPR003690 GO:0003690|GO:0006355
Pral4805g00006 622 SMART mt_12 517 547 IPR003690 GO:0003690|GO:0006355
Pral4805g00006 622 SMART mt_12 372 403 IPR003690 GO:0003690|GO:0006355
Pral4805g00006 622 SMART mt_12 549 580 IPR003690 GO:0003690|GO:0006355
Pral4805g00006 622 SMART mt_12 336 367 IPR003690 GO:0003690|GO:0006355
Pral4805g00006 622 SMART mt_12 481 512 IPR003690 GO:0003690|GO:0006355
Pral4805g00006 622 SMART mt_12 444 476 IPR003690 GO:0003690|GO:0006355
Pral4805g00006 622 Gene3D Transcription termination factor 3, mitochondrial 376 601 IPR038538 -
Pral4805g00006 622 Pfam mTERF 287 594 IPR003690 GO:0003690|GO:0006355
Pral4805g00006 622 PANTHER CGI-12 PROTEIN-RELATED 284 374 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4805g00006 Pral-Chr4805 46030 49988 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4805g00006 mTERF 8.3e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4805g00006 K15031 - qsa:O6P43_001902 897.501