Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4805g00005 ATGGTGGATCATCGGCGAAACATATTGTCTCTTGGGTTCCTGTTCTTGTTGCTTTTTCAGTTCACATTTGAGCAGCTTGAGCCTCTGAGTTCACCCGCAGAGAGACTCGCCCTACTTCAGCTTCGATCTTCCTTGGGCTTGAGAAGCAGGGAATGGCCAATAAAAGCCGACCCTTGCTTAACCTGGAATGGCATACGCTGTGAGAGTGGTAGAGTCACTGGCGTCAATATTTCTGGGTTTAGAAGAACAAGACTTGGCAGGCAAAACCCACAATTCTCTGTTGACGCTTTAGCCAATTTGACTTTCCTGCAATCCTTCAATGCGTCCAAGTTTCTTCTTCCTGGTCCTGTTCCTCACTGGTTTGGCCAAAAGCTTTCTTCACTCAAAGTGCTTGATCTTCGTTATTGCTCCATCATTGGTGCAATTCCTTCTACTCTTGGGAATCTAACAAGCCTAACCACTCTCTATTTATCTGATAATAACCTCACTGGAATCATTCCTGATAGTCTAAGTCAACTTTCAGCCCTTTCTGTTCTTGATCTTTCCCGGAATTTTCTCTCAGGATCCTTGCCCGATTCTTTTGCCTTTCTTGGGAATCTTTCTTTCCTCGACATTTCTTCCAACTATTTATCCGGTTCGATTCCCCAAGGCACTGGGGCACTTTCTAAATTACAATACTTGAATCTTTCCAACAATGGCTTAACTTCTTCTATACCTGCTCAACTTGGGGATCTTAGTAACCTAGTTGACCTTGATCTAAGTGATAATTACTTGTTCGGTCTGGTTCCTCCGGATTTAATGGGGTTGAGGAGCTTGCAGAGAATGAAGCTTGGGAACAACATTCTTGATGGACCTTTGCCGGAGAATTCGTTTCATACTACATCGGAGTTGCAGTTCATAGAGCTGAGACAAAATAATTTTACTGGGGCCTTGCCTGATAGGTTGTGGTATCTTCCAAGATTGAGCTTTGTGGATGTCTCCGGCAATAAGTTCAATGGTGTGCTTCCTAGTTCTAGTTCTTCTGCTAATGCTACTCCTACAGTCAAGGGCAATTTTTCTCATAATCTATTTTATGGAAGCATCACTCCTCTGCTCAAAAGGTTCAGTTTCATCGATCTGTCGAGCAATTATTTTGAGGGCAAGGTTCTGGATTTCGCAGTCAATGCATCACTGGGTAGTAACTGCCTGCAAAATGTATCAAATCAAAGGGCAACAGAAGAATGCCTCTCATTCTATTCCAGGAGGGGCCTCTCTTTTCATAATTTTGGGCAAGCAAACATGACAAGACCTCGTGCAGCAGAGAGCTCTGGGAAGAACAATGGAAGAAAATTTATACTAGCAGGAATTTTGGGTGGAGTTGGTTTGATCGCAGTTTTGGTGTTGTTAATTCTGCGCACTCGTAAGCGGAGCAAATCAAATAATACAGGAGCTCGTGTGGGTGCTGCTCTTGCTGGAGGCAATCCTGCACCTACTGATGCATTGATAGAATTATCAAAAGCAGGAGACTCATTTACATATCAGCAATTGCTCAAGGCTACAGGCAACTTCAGTGATGCAAATCTTATCAAACACGGTCACACCGGCGATCTGTTCAATGGTGTTTTGGAAAGTGGGATATCTGTAGTGATAAAAAGGATTGATTTGCGTTCAACTGAAAATGAGAATGCTTACATGTCAGAATTGGACCTTTTCAGTAAAGTTTCTCATCCAAGATTGGTTCCCCTGTTCGGTCATTGCTTAGAAAATGACAAAGAGAAGTTCCTGGTTTATAAACATATGCCAAATGGGGACTTATTGAATTGCATGCGCAACAGAGAAACTACACATAAAGATGGTACATTGCAGTCTTTGGATTGGATAACAAGATTGAAAATTTCTATTGGAACTGCGGAGGCCTTGTGTTTTCTTCATCATGAATGCAATCCACCCTTTGTTCACAGGGATATTCAAGCAACCAGTGTACTTCTAGATGATAAATATGAAGTCCGGTTAGGGAGTCTAAGTGAAGCCTGCACTCAGGGAGGGGATACTCATCAAAGGAGAATCTCAAGGTTGCTACGGTTACCCCAGTCATCTGATCAAGGCTCATCAGGTTCATCATCACCAGCAGTTTATGCCTATGATGTGTATTGCTTTGGGAAAGTATTGCTTGAGATGGTAACTGGGAAGCTAGGAATTGGTGCATCCGGTGATGCACAAGTAAAAGAATGGTTGGAACAGACACTACCTTACGTTAGTATTTATGACAAGGATCTGGTAACCAAGATTGTGGATCCATCCATGGTTGTCGACGAGGATTTCTTAGAGGAAGTGCGGGCAGTGGCCATCATCGCGAGGTCTTGCCTGAACCCCAAACCTTCGAGACGACCCCAGATGAGATTTGTCCTCAAGGCTCTTGAAAACCCACTAAAAGTCATAAGGGAAGAGAGTTACAGTTCTGCAAGGCTGAGAACAACCTCTTCCAGAGGCTCTTGGAATGCTGCTCTGTTTGCTAGTTGGCGTCAGAATTCTGATGTAACTGTAGTTCCGGCAGTTTCTGGTTCAAGAGCTGAAGAAGGCCAGCTTTCATCGTCCCGGAGGCGTCGTTCGAATGAGATAGTTCCGGAACCATCTAGCAGCATTCAAGAGGAGGACAAGCTCGAGTAG 2646 0.4384 MVDHRRNILSLGFLFLLLFQFTFEQLEPLSSPAERLALLQLRSSLGLRSREWPIKADPCLTWNGIRCESGRVTGVNISGFRRTRLGRQNPQFSVDALANLTFLQSFNASKFLLPGPVPHWFGQKLSSLKVLDLRYCSIIGAIPSTLGNLTSLTTLYLSDNNLTGIIPDSLSQLSALSVLDLSRNFLSGSLPDSFAFLGNLSFLDISSNYLSGSIPQGTGALSKLQYLNLSNNGLTSSIPAQLGDLSNLVDLDLSDNYLFGLVPPDLMGLRSLQRMKLGNNILDGPLPENSFHTTSELQFIELRQNNFTGALPDRLWYLPRLSFVDVSGNKFNGVLPSSSSSANATPTVKGNFSHNLFYGSITPLLKRFSFIDLSSNYFEGKVLDFAVNASLGSNCLQNVSNQRATEECLSFYSRRGLSFHNFGQANMTRPRAAESSGKNNGRKFILAGILGGVGLIAVLVLLILRTRKRSKSNNTGARVGAALAGGNPAPTDALIELSKAGDSFTYQQLLKATGNFSDANLIKHGHTGDLFNGVLESGISVVIKRIDLRSTENENAYMSELDLFSKVSHPRLVPLFGHCLENDKEKFLVYKHMPNGDLLNCMRNRETTHKDGTLQSLDWITRLKISIGTAEALCFLHHECNPPFVHRDIQATSVLLDDKYEVRLGSLSEACTQGGDTHQRRISRLLRLPQSSDQGSSGSSSPAVYAYDVYCFGKVLLEMVTGKLGIGASGDAQVKEWLEQTLPYVSIYDKDLVTKIVDPSMVVDEDFLEEVRAVAIIARSCLNPKPSRRPQMRFVLKALENPLKVIREESYSSARLRTTSSRGSWNAALFASWRQNSDVTVVPAVSGSRAEEGQLSSSRRRRSNEIVPEPSSSIQEEDKLE 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4805g00005 881 Gene3D Ribonuclease Inhibitor 293 408 IPR032675 -
Pral4805g00005 881 ProSiteProfiles Protein kinase domain profile. 516 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4805g00005 881 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 31 190 - -
Pral4805g00005 881 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Pral4805g00005 881 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Pral4805g00005 881 Pfam Protein tyrosine and serine/threonine kinase 522 798 IPR001245 GO:0004672|GO:0006468
Pral4805g00005 881 Gene3D Phosphorylase Kinase; domain 1 489 592 - -
Pral4805g00005 881 MobiDBLite consensus disorder prediction 854 881 - -
Pral4805g00005 881 Gene3D Ribonuclease Inhibitor 187 292 IPR032675 -
Pral4805g00005 881 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 113 797 - -
Pral4805g00005 881 Pfam Leucine rich repeat 151 210 IPR001611 GO:0005515
Pral4805g00005 881 Pfam Leucine rich repeat 223 280 IPR001611 GO:0005515
Pral4805g00005 881 Pfam Leucine Rich Repeat 127 149 IPR001611 GO:0005515
Pral4805g00005 881 Gene3D Transferase(Phosphotransferase) domain 1 593 819 - -
Pral4805g00005 881 SMART LRR_typ_2 318 341 IPR003591 -
Pral4805g00005 881 SMART LRR_typ_2 197 220 IPR003591 -
Pral4805g00005 881 SMART LRR_typ_2 221 245 IPR003591 -
Pral4805g00005 881 SMART LRR_typ_2 173 196 IPR003591 -
Pral4805g00005 881 SMART LRR_typ_2 149 172 IPR003591 -
Pral4805g00005 881 ProSiteProfiles Leucine-rich repeat profile. 151 172 IPR001611 GO:0005515
Pral4805g00005 881 MobiDBLite consensus disorder prediction 844 881 - -
Pral4805g00005 881 FunFam Leucine-rich repeat receptor protein kinase EMS1 191 289 - -
Pral4805g00005 881 SUPERFAMILY Protein kinase-like (PK-like) 498 799 IPR011009 -
Pral4805g00005 881 FunFam Putative LRR receptor-like serine/threonine-protein kinase 593 819 - -
Pral4805g00005 881 SUPERFAMILY L domain-like 60 337 - -
Pral4805g00005 881 FunFam Predicted protein 487 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4805g00005 Pral-Chr4805 41545 45446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4805g00005 33 690 Miscellaneous Gene Families AT2G16250 54.192 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pral4805g00005 PK_Tyr_Ser-Thr 4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4805g00005 - - qsa:O6P43_001901 1108.2