Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4805g00004 ATGGCGTCTGCTGAAGTTGAATTTAGGTGCTTCGTCGGGGGGCTCGCATGGGCTACCGACAGCGAGGCCCTTGAGAAGGCCTTTGCTCCCTTTGGCGAAATCGTCGAATCGAAGGTTATTAACGACCGCGAGACTGGCAGGTCGAGAGGGTTCGGATTCGTAACCTTCTCGTCTGAGCAGTCCATGAGAGATGCTATCGAGGGAATGAACGGCCAGGACCTTGATGGCCGTAATATTACTGTGAACGAGGCTCAATCCCGGGGCCGAGGTGGCGGTGGAGGCGGTGGGTATGGCAGTGGCGGAGGCTACGGAGGTGGTGGATATAGCCGTGGTGGAGGCGGATACGGGGGCGGGGGTGGAGGCCGCCGTGAAGGTGGATACAACCGTAACGGCGGCGGAGGCTACGGTGGAGGCGGCGGCGGCGGCTACGGTGGTGGTTATGGCGGTGGGCGTGACCGTGGTTATGGCGACGGTGGATCTCGGTACTCCAGAGGCGGAGGTGCTTCTGACGGAAGCTGGAGGAGCTAG 528 0.6155 MASAEVEFRCFVGGLAWATDSEALEKAFAPFGEIVESKVINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQDLDGRNITVNEAQSRGRGGGGGGGYGSGGGYGGGGYSRGGGGYGGGGGGRREGGYNRNGGGGYGGGGGGGYGGGYGGGRDRGYGDGGSRYSRGGGASDGSWRS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4805g00004 175 Gene3D - 2 104 IPR012677 -
Pral4805g00004 175 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Pral4805g00004 175 PANTHER GEO13361P1-RELATED 6 158 - -
Pral4805g00004 175 FunFam Glycine-rich RNA-binding protein GRP1A 2 111 - -
Pral4805g00004 175 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Pral4805g00004 175 MobiDBLite consensus disorder prediction 69 103 - -
Pral4805g00004 175 MobiDBLite consensus disorder prediction 120 175 - -
Pral4805g00004 175 CDD RRM2_NsCP33_like 9 84 - -
Pral4805g00004 175 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Pral4805g00004 175 SMART rrm1_1 9 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4805g00004 Pral-Chr4805 32000 33127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4805g00004 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 32.911 5.29e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4805g00004 - K13195 fve:101299909 162.925