Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4804g00002 ATGGCTCCCAAGAAGGATAAGGGTCCTCCACCTTCCTCCAAACCCGCCAAGTCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTGCTCTTTGACCAGGCCACCTATGACAAGCTCCTCTCTGAGGCACCCAAATACAAGCTTATCACTCCGTCAATTCTCTCTGATCGTTTGAGGATTAATGGATCGCTCGCAAGGAAGGCAATTAGAGAATTGATGGCGAGAGGTGCAATCAGGATGGTATCCTCACATGCCAGTCAGCAGATATACACTAGGGCCACTAACACCTAG 327 0.4954 MAPKKDKGPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGAIRMVSSHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4804g00002 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Pral4804g00002 108 MobiDBLite consensus disorder prediction 1 36 - -
Pral4804g00002 108 FunFam 40S ribosomal protein S25 21 108 - -
Pral4804g00002 108 Pfam S25 ribosomal protein 11 105 IPR004977 -
Pral4804g00002 108 Gene3D - 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4804g00002 Pral-Chr4804 7608 9481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4804g00002 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 5.27e-55 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4804g00002 K02975 - nnu:104586441 158.303