Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4803g00106 | ATGGGGAAGAAGAAAGTGAAGGAAAGTGGAGGGAAAGAGCACTGCCCCTCTACTGTTTTTGTCTCGAACTTGCCCTACTCATTCACCAATTCTCAGTTGGAGGAGACGTTTAGCGAAGTTGGACCAATCAGGCGTTGCTTCATGGTCATGCAGAAGGGGTCATCTCAGCATCGTGGTTTTGGTTATGTTCAATTCGCTGTCGAGGAAGATGCTAACCGTGCAATTGAGTCGAAGAATGGTTCATCTGTTGGAGGCCGGAAAATTGCAGTAAAGCATGCCATGCCTCGTCCTCCCCGTGAAGCACGACAATCAAAGTCAAACCAAGCAGAGAATGCTGATGATATCCCAAAGTCAAAAAATGATGACAATGATGGTGGCTTTTCTGGAGTGAAGAAGCCTTCGTCAGTTACTAAGGAAAAAGTTGTAAATAATGAAAACCATTCAAGGAAGCATAGTGAAGTGAAAAAAGCAGTTCTTTGTAGGGATATAGCAGATGAGGGGGGCTGTTCTGAAAAGCAGAGGGTTGCTAGAACTGTCATATTTGGCGGTCTTATCAATTCGGATATGGCTGAAGTTGTTCACAGCCAAGTACGGGAGATTGGCAGTGTGTGTTCTATAAAGTACCCCCTTCCTAGGGAAGAATTTGAACAGCATGGTCTCTTGCAAGATGGATGTAAATTGGATGCTTCAGCTGTACTTTACACAAGTGTGAAATCAGCACGAGCTTCTGTTGCGTTGCTGCATCAGAAAGAAATTGGAGGAGGAATTGTCTGGGCACGTCAATTGGGTGGAGAGGGTTCCAAGACACAGAAATGGAAGCTTATTGTTAGAAATCTTCCGTTCAAGGCCAAGGAAAATGAAGTAAAAGAAATGTTTTCATCTGCTGGGTTCGTGTGGGATGTATTTATTCCACGCAAGTCTGATACAGGACTGTCTAAGGGTTTTGCATTTGTGAAATTCACTTGCAAGCAACATGCAGAAAATGCTATTCAGAAGCTTAATGGATCAAAGCTTGGCAAGCGCCTCATAGCTGTTGATTGGGCTGTTCCAAAGAAGATATATAGCAATGATAAAAATGGTATGCTTGCTTTGGAAAATGGACAACATAAGGTGACAGAGGAAGATGGTAGTAGTTCTGAGGACAATTCAGAGGATGATGTTGAGGATACAGGCAAACAGGACCATCAAGGAGATGATACTGATCGAAATGACTGCAGCTCCTCCCAGGAAGAAGATGTGCCAGCTGAAGTTAACTTTGATAAGGAAGCAGAGATTGCCAAAAAGGTTCTTAAGAACCTAATGACATGCTCCACCAAAGGAACATCCGCAAATGATGATTCTATGTTTCCCAAGAAAAACAAGGAATCAAAATCCAATAAAAACATTAATGAGGCAGATAAAAAGTCATCCAAGGAGTTAGAAAAGGTTACAGATGTTTTTGAGCCTGAAATATTGGGCAAAAGCGAGATCTCTAATCCTAAGCAAACAGAAGAAGATTTGCAGAGAACAGTTTTCATAAGTAACCTTCCCTTTGACTGTGCTAATGAAGAAGTGAAACAACGATTCTCTGGATTTGGGGAAGTGGAAGACTTTAAAGCAGTCCTCCACCAGGTGACCAAACGGCCAAGAGGAACTGGTTTTCTCAAGTTTAAAACTGCAGATGCAGCTGATGCTGCAGTTTCAACTGCTAACGCTGCTTCTGGCTTGGGTATTCTTCTCAAAGGTAGGCCATTAAAAGTTTTTAGGGCTTTAGATAAGAAGTCGGCTCGTGATAAGGAACTAAAGAAGGCCCAAGATGACAATCATGACCACCGCAATCTCTACCTGGCAAAGGAAGGACTCATTCTTGAAGGAACTCCAGCTGCTGAAGGGGTTTCAGCCAGTGATATGTTAAAACGCCAGGAGTTGGAAAGAAAAAAGGCAACAAAGCTACAATCGCCAAATTTCCATGTTTCAAGGACTAGACTTGTTATTTACAACTTACCAAAGTCGATGACTGAAAAAGAGCTCAAGAAGCGTTGCGTTGATGCAGTTACCTCTAGAGCCACCAAGCAAAAGCCTCAAATTCGGCAGATAAAGTTCTTGAAGGATGTGAAGAAAGGAAAGGTTGTTACAAAACATCATTCACGTGGAGTTGCCTTTGTTGAATTTTCAGAGCATCAACATGCCCTTGTGGCTTTACGAGTTCTGAATAATAATCCAGAAACTTTTGGTCCTGAACATCGGCCAATTGTGGAGTTTGCTGTTGATAATGTTCAAACAATTAAACTTCGGAAAGCAAAGCTACAGTTTCAGCAGCAGGCTGCTGCTCACGGTGACAGCAACGTTGAGGAAAATGAGGAACCCGACGTTTCAGGTTTCCATACCAATCGAAAGGATAGAAAACGAAAATCACAGGATCATGACAAACCGGTGAAGGATTCAGTGCTCGATAAAGAAGGTGAACCAGCAAGTATATTGCCAAATCAAAGTGCCACGGGTGCACGCAATGCCAAAAGACAGAAAGGCAACCGTAAAAGTAAAAAGGCAGAAGGGTCATCGTCACATAAAGAAAATTCAGAAACCTTGTCCAAGAAGCCAAATGTTTACCAAGATGACCAGAATCATGGTGGCAGGACGTCAAACACTGTTACTGCCTCCTCCAAAACAATCAACGGTAAAAAGGAAGGTCATGGATTGAAGAAGAGGAGGACTCAGAATCAAGCAGAAGCTGGGGAAAATGTACCAAGAAAACGATCAAAAAAGAATAAAGAGCCTGTAGGGAAAGACGTGGTGGATAAGCTTGACATGCTTATACAGCAATACAGATCGAAGTTCTCACAGCAGGGTTCACAAGGGAATGATGGGGAGAGAAAACCTTCCAAACAGCTAAGAAAATGGTTTGAACCATAA | 2892 | 0.426 | MGKKKVKESGGKEHCPSTVFVSNLPYSFTNSQLEETFSEVGPIRRCFMVMQKGSSQHRGFGYVQFAVEEDANRAIESKNGSSVGGRKIAVKHAMPRPPREARQSKSNQAENADDIPKSKNDDNDGGFSGVKKPSSVTKEKVVNNENHSRKHSEVKKAVLCRDIADEGGCSEKQRVARTVIFGGLINSDMAEVVHSQVREIGSVCSIKYPLPREEFEQHGLLQDGCKLDASAVLYTSVKSARASVALLHQKEIGGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKENEVKEMFSSAGFVWDVFIPRKSDTGLSKGFAFVKFTCKQHAENAIQKLNGSKLGKRLIAVDWAVPKKIYSNDKNGMLALENGQHKVTEEDGSSSEDNSEDDVEDTGKQDHQGDDTDRNDCSSSQEEDVPAEVNFDKEAEIAKKVLKNLMTCSTKGTSANDDSMFPKKNKESKSNKNINEADKKSSKELEKVTDVFEPEILGKSEISNPKQTEEDLQRTVFISNLPFDCANEEVKQRFSGFGEVEDFKAVLHQVTKRPRGTGFLKFKTADAADAAVSTANAASGLGILLKGRPLKVFRALDKKSARDKELKKAQDDNHDHRNLYLAKEGLILEGTPAAEGVSASDMLKRQELERKKATKLQSPNFHVSRTRLVIYNLPKSMTEKELKKRCVDAVTSRATKQKPQIRQIKFLKDVKKGKVVTKHHSRGVAFVEFSEHQHALVALRVLNNNPETFGPEHRPIVEFAVDNVQTIKLRKAKLQFQQQAAAHGDSNVEENEEPDVSGFHTNRKDRKRKSQDHDKPVKDSVLDKEGEPASILPNQSATGARNAKRQKGNRKSKKAEGSSSHKENSETLSKKPNVYQDDQNHGGRTSNTVTASSKTINGKKEGHGLKKRRTQNQAEAGENVPRKRSKKNKEPVGKDVVDKLDMLIQQYRSKFSQQGSQGNDGERKPSKQLRKWFEP | 963 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4803g00106 | 963 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 17 | 95 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 934 | 950 | - | - | |
Pral4803g00106 | 963 | Gene3D | - | 259 | 403 | IPR012677 | - | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 370 | 420 | - | - | |
Pral4803g00106 | 963 | CDD | RRM1_RBM28_like | 18 | 96 | - | - | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 895 | 925 | - | - | |
Pral4803g00106 | 963 | FunFam | RNA-binding motif protein 28 | 653 | 748 | - | - | |
Pral4803g00106 | 963 | CDD | RRM4_RBM28_like | 654 | 751 | - | - | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 768 | 963 | - | - | |
Pral4803g00106 | 963 | CDD | RRM3_RBM28_like | 502 | 583 | - | - | |
Pral4803g00106 | 963 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 272 | 350 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | PANTHER | RNA-BINDING MOTIF PROTEIN 14B | 14 | 962 | - | - | |
Pral4803g00106 | 963 | CDD | RRM2_RBM28_like | 273 | 349 | - | - | |
Pral4803g00106 | 963 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 502 | 585 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 840 | 856 | - | - | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 388 | 420 | - | - | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 112 | 126 | - | - | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 774 | 813 | - | - | |
Pral4803g00106 | 963 | Gene3D | - | 653 | 748 | IPR012677 | - | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 857 | 885 | - | - | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 448 | 470 | - | - | |
Pral4803g00106 | 963 | SUPERFAMILY | RNA-binding domain, RBD | 502 | 732 | IPR035979 | GO:0003676 | |
Pral4803g00106 | 963 | FunFam | - | 2 | 128 | - | - | |
Pral4803g00106 | 963 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 654 | 762 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | SMART | rrm1_1 | 273 | 346 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | SMART | rrm1_1 | 503 | 581 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | SMART | rrm1_1 | 655 | 746 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | SMART | rrm1_1 | 18 | 91 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | SUPERFAMILY | RNA-binding domain, RBD | 17 | 258 | IPR035979 | GO:0003676 | |
Pral4803g00106 | 963 | SUPERFAMILY | RNA-binding domain, RBD | 268 | 355 | IPR035979 | GO:0003676 | |
Pral4803g00106 | 963 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 274 | 343 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 504 | 564 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 19 | 88 | IPR000504 | GO:0003723 | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 437 | 470 | - | - | |
Pral4803g00106 | 963 | Gene3D | - | 434 | 599 | IPR012677 | - | |
Pral4803g00106 | 963 | Gene3D | - | 2 | 109 | IPR012677 | - | |
Pral4803g00106 | 963 | MobiDBLite | consensus disorder prediction | 76 | 154 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4803g00106 | Pral-Chr4803 | 546831 | 554542 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4803g00106 | 17 | 97 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 34.568 | 4.52e-08 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4803g00106 | K14573 | - | gmx:100794821 | 1283.86 |