Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4803g00105 | ATGGGGAAGAAGAAAGTGAAGGAAAGTGGAGGGAAAGAGCACTGCCCCTCTACTGTTTTTGTCTCGAACTTGCCCTACTCATTCACCAATTCTCAGTTGGAGGAGACGTTTAGCGAAGTTGGACCAATCAGGCGTTGCTTCATGGTCATGCAGAAGGGGTCATCTCAGCATCGTGGTTTTGGTTATGTTCAATTCGCTGTCGAGGAAGATGCTAACCGTGCAATTGAGTCGAAGAATGGTTCATCTGTTGGAGGCCGGAAAATTGCAGTAAAGCATGCCATGCCTCGTCCTCCCCGTGAAGCACGACAATCAAAGTCAAACCAAGCAGAGAATGCTGATGATATCCCAAAGTCAAAAAATGATGACAATGATGGTGGCTTTTCTGGAGTGAAGAAGCCTTCGTCAGTTACTAAGGAAAAAGTTGTAAATAATGAAAACCATTCAAGGAAGCATAGTGAAGTGAAAAAAGCAGTTCTTTGTAGGGATATAGCAGATGAGGGGGGCTGTTCTGAAAAGCAGAGGGTTGCTAGAACTGTCATATTTGGCGGTCTTATCAATTCGGATATGGCTGAAGTTGTTCACAGCCAAGTACGGGAGATTGGCAGTGTGTGTTCTATAAAGTACCCCCTTCCTAGGGAAGAATTTGAACAGCATGGTCTCTTGCAAGATGGATGTAAATTGGATGCTTCAGCTGTACTTTACACAAGTGTGAAATCAGCACGAGCTTCTGTTGCGTTGCTGCATCAGAAAGAAATTGGAGGAGGAATTGTCTGGGCACGTCAATTGGGTGGAGAGGGTTCCAAGACACAGAAATGGAAGCTTATTGTTAGAAATCTTCCGTTCAAGGCCAAGGAAAATGAAGTAAAAGAAATGTTTTCATCTGCTGGGTTCGTGTGGGATGTATTTATTCCACGCAAGTCTGATACAGGACTGTCTAAGGGTTTTGCATTTGTGAAATTCACTTGCAAGCAACATGCAGAAAATGCTATTCAGAAGCTTAATGGATCAAAGCTTGGCAAGCGCCTCATAGCTGTTGATTGGGCTGTTCCAAAGAAGATATATAGCAATGATAAAAATGGACAACATAAGGTGACAGAGGAAGATGGTAGTAGTTCTGAGGACAATTCAGAGGATGATGTTGAGGATACAGGCAAACAGGACCATCAAGGAGATGATACTGATCGAAATGACTGCAGCTCCTCCCAGGAAGAAGATGTGCCAGCTGAAGTTAACTTTGATAAGGAAGCAGAGATTGCCAAAAAGGTTCTTAAGAACCTAATGACATGCTCCACCAAAGGAACATCCGCAAATGATGATTCTATGTTTCCCAAGAAAAACAAGGAATCAAAATCCAATAAAAACATTAATGAGGCAGATAAAAAGTCATCCAAGGAGTTAGAAAAGGTTACAGATGTTTTTGAGCCTGAAATATTGGGCAAAAGCGAGATCTCTAATCCTAAGCAAACAGAAGAAGATTTGCAGAGAACAGTTTTCATAAGTAACCTTCCCTTTGACTGTGCTAATGAAGAAGTGAAACAACGATTCTCTGGATTTGGGGAAGTGGAAGACTTTAAAGCAGTCCTCCACCAGGTGACCAAACGGCCAAGAGGAACTGGTTTTCTCAAGTTTAAAACTGCAGATGCAGCTGATGCTGCAGTTTCAACTGCTAACGCTGCTTCTGGCTTGGGTATTCTTCTCAAAGGTAGGCCATTAAAAGTTTTTAGGGCTTTAGATAAGAAGTCGGCTCGTGATAAGGAACTAAAGAAGGCCCAAGATGACAATCATGACCACCGCAATCTCTACCTGGCAAAGGAAGGACTCATTCTTGAAGGAACTCCAGCTGCTGAAGGGGTTTCAGCCAGTGATATGTTAAAACGCCAGGAGTTGGAAAGAAAAAAGGCAACAAAGCTACAATCGCCAAATTTCCATGTTTCAAGGACTAGACTTGTTATTTACAACTTACCAAAGTCGATGACTGAAAAAGAGCTCAAGAAGCGTTGCGTTGATGCAGTTACCTCTAGAGCCACCAAGCAAAAGCCTCAAATTCGGCAGATAAAGTTCTTGAAGGATGTGAAGAAAGGAAAGGTTGTTACAAAACATCATTCACGTGGAGTTGCCTTTGTTGAATTTTCAGAGCATCAACATGCCCTTGTGGCTTTACGAGTTCTGAATAATAATCCAGAAACTTTTGGTCCTGAACATCGGCCAATTGTGGAGTTTGCTGTTGATAATGTTCAAACAATTAAACTTCGGAAAGCAAAGCTACAGTTTCAGCAGCAGGCTGCTGCTCACGGTGACAGCAACGTTGAGGAAAATGAGGAACCCGACGTTTCAGGTTTCCATACCAATCGAAAGGATAGAAAACGAAAATCACAGGATCATGACAAACCGGTGAAGGATTCAGTGCTCGATAAAGAAGGTGAACCAGCAAGTATATTGCCAAATCAAAGTGCCACGGGTGCACGCAATGCCAAAAGACAGAAAGGCAACCGTAAAAGTAAAAAGGCAGAAGGGTCATCGTCACATAAAGAAAATTCAGAAACCTTGTCCAAGAAGCCAAATGTTTACCAAGATGACCAGAATCATGGTGGCAGGACGTCAAACACTGTTACTGCCTCCTCCAAAACAATCAACGGTAAAAAGGAAGGTCATGGATTGAAGAAGAGGAGGACTCAGAATCAAGCAGAAGCTGGGGAAAATGTACCAAGAAAACGATCAAAAAAGAATAAAGAGCCTGTAGGGAAAGACGTGGTGGATAAGCTTGACATGCTTATACAGCAATACAGATCGAAGTTCTCACAGCAGGGTTCACAAGGGAATGATGGGGAGAGAAAACCTTCCAAACAGCTAAGAAAATGGTTTGAACCATAA | 2871 | 0.4263 | MGKKKVKESGGKEHCPSTVFVSNLPYSFTNSQLEETFSEVGPIRRCFMVMQKGSSQHRGFGYVQFAVEEDANRAIESKNGSSVGGRKIAVKHAMPRPPREARQSKSNQAENADDIPKSKNDDNDGGFSGVKKPSSVTKEKVVNNENHSRKHSEVKKAVLCRDIADEGGCSEKQRVARTVIFGGLINSDMAEVVHSQVREIGSVCSIKYPLPREEFEQHGLLQDGCKLDASAVLYTSVKSARASVALLHQKEIGGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKENEVKEMFSSAGFVWDVFIPRKSDTGLSKGFAFVKFTCKQHAENAIQKLNGSKLGKRLIAVDWAVPKKIYSNDKNGQHKVTEEDGSSSEDNSEDDVEDTGKQDHQGDDTDRNDCSSSQEEDVPAEVNFDKEAEIAKKVLKNLMTCSTKGTSANDDSMFPKKNKESKSNKNINEADKKSSKELEKVTDVFEPEILGKSEISNPKQTEEDLQRTVFISNLPFDCANEEVKQRFSGFGEVEDFKAVLHQVTKRPRGTGFLKFKTADAADAAVSTANAASGLGILLKGRPLKVFRALDKKSARDKELKKAQDDNHDHRNLYLAKEGLILEGTPAAEGVSASDMLKRQELERKKATKLQSPNFHVSRTRLVIYNLPKSMTEKELKKRCVDAVTSRATKQKPQIRQIKFLKDVKKGKVVTKHHSRGVAFVEFSEHQHALVALRVLNNNPETFGPEHRPIVEFAVDNVQTIKLRKAKLQFQQQAAAHGDSNVEENEEPDVSGFHTNRKDRKRKSQDHDKPVKDSVLDKEGEPASILPNQSATGARNAKRQKGNRKSKKAEGSSSHKENSETLSKKPNVYQDDQNHGGRTSNTVTASSKTINGKKEGHGLKKRRTQNQAEAGENVPRKRSKKNKEPVGKDVVDKLDMLIQQYRSKFSQQGSQGNDGERKPSKQLRKWFEP | 956 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4803g00105 | 956 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 17 | 95 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 76 | 153 | - | - | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 833 | 849 | - | - | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 430 | 463 | - | - | |
Pral4803g00105 | 956 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 495 | 578 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 767 | 806 | - | - | |
Pral4803g00105 | 956 | CDD | RRM1_RBM28_like | 18 | 96 | - | - | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 441 | 463 | - | - | |
Pral4803g00105 | 956 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 272 | 350 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | CDD | RRM2_RBM28_like | 273 | 349 | - | - | |
Pral4803g00105 | 956 | SUPERFAMILY | RNA-binding domain, RBD | 495 | 725 | IPR035979 | GO:0003676 | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 850 | 878 | - | - | |
Pral4803g00105 | 956 | Gene3D | - | 2 | 109 | IPR012677 | - | |
Pral4803g00105 | 956 | Gene3D | - | 430 | 592 | IPR012677 | - | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 112 | 126 | - | - | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 888 | 918 | - | - | |
Pral4803g00105 | 956 | SUPERFAMILY | RNA-binding domain, RBD | 268 | 360 | IPR035979 | GO:0003676 | |
Pral4803g00105 | 956 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 647 | 755 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | Gene3D | - | 646 | 741 | IPR012677 | - | |
Pral4803g00105 | 956 | CDD | RRM4_RBM28_like | 647 | 744 | - | - | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 381 | 413 | - | - | |
Pral4803g00105 | 956 | Gene3D | - | 260 | 395 | IPR012677 | - | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 358 | 413 | - | - | |
Pral4803g00105 | 956 | CDD | RRM3_RBM28_like | 495 | 576 | - | - | |
Pral4803g00105 | 956 | FunFam | - | 2 | 128 | - | - | |
Pral4803g00105 | 956 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 497 | 557 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 274 | 343 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 19 | 88 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | FunFam | RNA-binding motif protein 28 | 646 | 741 | - | - | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 761 | 956 | - | - | |
Pral4803g00105 | 956 | SUPERFAMILY | RNA-binding domain, RBD | 17 | 258 | IPR035979 | GO:0003676 | |
Pral4803g00105 | 956 | PANTHER | RNA-BINDING MOTIF PROTEIN 14B | 14 | 955 | - | - | |
Pral4803g00105 | 956 | SMART | rrm1_1 | 273 | 346 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | SMART | rrm1_1 | 648 | 739 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | SMART | rrm1_1 | 496 | 574 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | SMART | rrm1_1 | 18 | 91 | IPR000504 | GO:0003723 | |
Pral4803g00105 | 956 | MobiDBLite | consensus disorder prediction | 927 | 943 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4803g00105 | Pral-Chr4803 | 546831 | 554542 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4803g00105 | 17 | 97 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 34.568 | 4.81e-08 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4803g00105 | K14573 | - | gmx:100794821 | 1274.23 |