Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4803g00096 ATGGAAGGAGAAGAAGTACTGAGGAGCAAGTGCCAAGACTGCGGGAACCAAGCGAAGAAAGGTTGTGAGTATGAGAGATGTAGAACTTGCTGCAACATCAGAGGGTTTGAGTGCGAAACACATGTTCACAGCACTTGGGTTCCTGTAGATCACCGAAGACGCCATAAGGAGCATCATCCTCCTTTCCCCAAAAGGCACAAACACAACAACCCTAATTATCCAGCAGATAAAAAGGAGTTGAAGTTTCCAGGTTTGGTGAGCATGACGGCGACGTTTCGATGCGTACGAGTGCGATCAAATGATGACTGGGTGAATGAATTAGCGTACCATGCGTCGGTGAGGATTGGAGGGCATGTGTTTTGCGGTCTTCTTCATGATCAAGGCCCTTCTCTTGCTCAGACTTCCTCAGTCCCTCTTCTTCAGCATAACAATCTAATCAACGTAGCAACACAGACGACCCATAATATTGATCCCGCAACAATGGCTCCTCCATTATCATCTTCTTCTGCTCGTGACTCTATCTTTCATCCAACACACCCTTTTCCCCTACCACCTTCTATGCCTTATTTCTCCATCCCCCAACCGTAA 588 0.4711 MEGEEVLRSKCQDCGNQAKKGCEYERCRTCCNIRGFECETHVHSTWVPVDHRRRHKEHHPPFPKRHKHNNPNYPADKKELKFPGLVSMTATFRCVRVRSNDDWVNELAYHASVRIGGHVFCGLLHDQGPSLAQTSSVPLLQHNNLINVATQTTHNIDPATMAPPLSSSSARDSIFHPTHPFPLPPSMPYFSIPQP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4803g00096 195 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 8 182 IPR007818 GO:0003700|GO:0006355
Pral4803g00096 195 NCBIfam putative zinc finger domain, LRP1 type 10 51 IPR006510 -
Pral4803g00096 195 MobiDBLite consensus disorder prediction 52 74 - -
Pral4803g00096 195 MobiDBLite consensus disorder prediction 52 66 - -
Pral4803g00096 195 Pfam Domain of unknown function (DUF702) 9 129 - -
Pral4803g00096 195 NCBIfam LRP1 C-terminal domain 81 129 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4803g00096 Pral-Chr4803 511801 512841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4803g00096 11 184 C2H2 Transcription Factor Family AT3G51060 37.383 1.54e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pral4803g00096 DUF702 1.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4803g00096 - - pcin:129285032 262.307