Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4803g00084 ATGGAGGTTGTGGCAGCGAACGCCTTAAAATCGAGTTTGCACAGAGAATTGTCGTGTCTGAAGTCGAGCCAGCAACCCTTCGGCGAGGAAATTTGGTGTTTGAATTCGAATAACGGCGTTGCCGGTGAGGATTTCTGGGTGGATGACTTATTCGATTTCTCTCAGAGTGAATTTCAACCTGAATATGAAGAAGACGACGAGGAAAAAGACAGTCTCTCCGCTTCCTCCTCACATGACCGGAGCGAAGAAGACGCCAACTCCAACTCCTCTTCCGGTCCCGGCGATTCTGACCTCATTTTCCCTAACGAACTCGCCGTTCCGGACGATGATTTGGCTGACTTAGAATGGGTTTCTCATTTCGTTGACGATTCTGTACCGGCGTTCCCTCTTCTGTACCCCGTCCGTTCCGAGGAAATGAAGACCCGGTCTGAACAGGAACCTAGCCCGGGCTTTGCGAAAACCCCTTGTTTTCCCTTTGAATTTCCCGTCAAGGCGAGAAGCACCAGGTGTAGAAGAGCCAGGATGTTTAGCCCCTTGCTTTCCCGGCCATCTTCGCCACCGTCTTCATGTTCGTCGGTCCTTTCCTCGTCGTTGACTCTTATCACCGTTGGCGCGGCTCCGAAGACAGCCTTGGTACATGGCGTTACGGAAACGCCCTTGAAAAAGCAGAAGAAAAGGGCGGAGACTCAAGCCGGTGTTAGTGGTGGGTCCCAAATTCAGCGTCGGTGCACCCATTGTCAAGTGCAGAAGACTCCGCAATGGAGGACAGGTCCGCTTGGCCCCAAACACTTTGTAACGCTTGTGGGGTCCGGTACAAGTCGGGTCGGCTTTTCCCGGAGTATAGACCGGCCTGTAGCCCGACTTTCTCTATCGATGTTCACTCGAACAGCCATCGTAAAGTGTTAG 906 0.5254 MEVVAANALKSSLHRELSCLKSSQQPFGEEIWCLNSNNGVAGEDFWVDDLFDFSQSEFQPEYEEDDEEKDSLSASSSHDRSEEDANSNSSSGPGDSDLIFPNELAVPDDDLADLEWVSHFVDDSVPAFPLLYPVRSEEMKTRSEQEPSPGFAKTPCFPFEFPVKARSTRCRRARMFSPLLSRPSSPPSSCSSVLSSSLTLITVGAAPKTALVHGVTETPLKKQKKRAETQAGVSGGSQIQRRCTHCQVQKTPQWRTGPLGPKHFVTLVGSGTSRVGFSRSIDRPVARLSLSMFTRTAIVKC 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4803g00084 301 Gene3D - 236 268 IPR013088 GO:0006355|GO:0008270
Pral4803g00084 301 MobiDBLite consensus disorder prediction 57 102 - -
Pral4803g00084 301 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 238 261 - -
Pral4803g00084 301 Pfam GATA zinc finger 243 262 IPR000679 GO:0006355|GO:0043565
Pral4803g00084 301 PANTHER GATA TRANSCRIPTION FACTOR 31 263 - -
Pral4803g00084 301 MobiDBLite consensus disorder prediction 71 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4803g00084 Pral-Chr4803 426335 427981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4803g00084 8 269 C2C2-Gata Transcription Factor Family AT5G66320 35.766 4.85e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral4803g00084 GATA 2.4e-06 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4803g00084 - - qsa:O6P43_011543 242.276