Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4803g00050 ATGGCGCCGAAACTTCATCGCCTGCGGCCTCAGGCAGTGAAGTTAATGCTGCTAGTTGCATTATGCACTTTGTCAGATTGCTATGATCCCTTGGATTCAAGCGGAAACATTACAGTAACTATTGACATTTACGGGAGAACGGACGATGGGTATCTGGCAAGGGTGACTCTGCAAAACTATTATCAATATCGTCATGTAACCAAACCAGGTTGGAAGCTTGGATGGACATGGACTAACAAAGAGGTGATCTGGTCGATGAAAGGGGCCTTCGCCGTTGATAGAGGAAACTGCTCAACTTACACAAACCCAATACCACACTCCTGCATGGAAAATCCCACAATAGTTGATTTCAGTTCAGATGTCTCAGAAGAAAGCAGATTAGAGAATTGCTGCCATGGTGGCCTTCTTTCCGCTTGGGCTATCAATCCTTCGAATTCGCTCTCTTCATTTGAACTCAAAGTAGGTAACCTGGCAAATGGTTCACTGGGACACGCACCTAGTAGCCTCACGTTAATGGCCCCAGGTCCTGGTTACACTTGTAGCCCACTTCTTGATACTGATCCCACGATCATCCCAGATTTTGGAGGACAACGAAAAGTTCCTGCTTACAGAACGTGGAAGTCAAAATGTACGTACTCCAGTTTTCTAGCATACCAATCACCAGTATGCTGTGCTTCGCTCTCAACATTTTACAATCCTACCATTACATCATGCCCCAGTTGCAGCTGCGGATGCCCAGAAGCGGCAAAAAGTACAAAGACTTGCATAAGGCCAGTTGGTTTCTCATCACAGTCAAATTATGACAATGATCGCGACATAATACAATGCACTGACCACATGTGCCCAATTCGAGTCCATTGGCATATTAAAAACAACTATAGGGATCACTGGAGAGTGAAACTTACAATTTCTAACTACATCCGCAACAGAAATTACACAAACTGGAATCTATTGGTTCAACATCCTGGCTTCAGCCAGCCAACAACAACGTATAGCTTCAACAGCACAGTGCTACCCACCGTTGGCTTTCAAGATGAGGTGGCACTGTTTTGGGGGATAGAATACTACAACGACGTACTGGTGCACTCTGAGGAGGATGGGTTGGGGTACGTGAGCACAGAGATACTGTTGAAGAAGGACCTTCACAGCTTCACTCTCACCAACGGCTGGGCTTTCCCCACCAGAGTTTACTTCAACGGTGAAGACTGTCAAATGCCTTTGCCTGACGCCTTCCCTGCCCTCCCTAATCCTGCTCCCTTCTCCCATTTCCCTTCTCTTCTTCTCCCTCCTCCTCACCACGCTTCTCCCCTTGCCTTTTATCCGTTCATGATCACTATTTGTATGCTCTTTTCTTCTTTCTATTTTCTCCAGAACATCTCTCTCTCCTTCTGTAGTTAG 1398 0.4614 MAPKLHRLRPQAVKLMLLVALCTLSDCYDPLDSSGNITVTIDIYGRTDDGYLARVTLQNYYQYRHVTKPGWKLGWTWTNKEVIWSMKGAFAVDRGNCSTYTNPIPHSCMENPTIVDFSSDVSEESRLENCCHGGLLSAWAINPSNSLSSFELKVGNLANGSLGHAPSSLTLMAPGPGYTCSPLLDTDPTIIPDFGGQRKVPAYRTWKSKCTYSSFLAYQSPVCCASLSTFYNPTITSCPSCSCGCPEAAKSTKTCIRPVGFSSQSNYDNDRDIIQCTDHMCPIRVHWHIKNNYRDHWRVKLTISNYIRNRNYTNWNLLVQHPGFSQPTTTYSFNSTVLPTVGFQDEVALFWGIEYYNDVLVHSEEDGLGYVSTEILLKKDLHSFTLTNGWAFPTRVYFNGEDCQMPLPDAFPALPNPAPFSHFPSLLLPPPHHASPLAFYPFMITICMLFSSFYFLQNISLSFCS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4803g00050 465 Pfam COBRA-like protein 51 213 IPR006918 GO:0010215|GO:0016020
Pral4803g00050 465 PIRSF COBRA 4 435 IPR006918 GO:0010215|GO:0016020
Pral4803g00050 465 PANTHER PROTEIN COBRA 16 421 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4803g00050 Pral-Chr4803 213162 217309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4803g00050 12 427 COBRA Gene Family AT3G02210 44.471 4.12e-135 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4803g00050 - - qsa:O6P43_011508 608.601