Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4803g00044 ATGGATGGTACAGCTGCTAGAAAAACTCAAAAGGCTGACAGAGAAAAACTGAGGAGGGACCGGCTCAATGAACAGTTTGTAGAATTGGGTAGCATTTTAGATCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTTGCTGATACAATCCAATTGCTGAAGGACCTTACTTCACAAGTTAGTAAACTTAAAGAGGAATATACTACGCTGACTGAAGAATCCCAAGAGTTGACTCAGGAGAAAAACGATCTTAGGGAAGAGAAGGCTTCACTTAAATCAGACATTGAGAGCCTGAATAACCAATACCAGCAACGACTCAGGACTGTGTTCCCTTGGACTGCAATGGATCACTCAGTTATGATGGCTCCACCTTCATATCCATATCCAGTGCCAGTGCCACTGGCAGTCCCTCCTGGGCCAATTCCCATGCATCCACCCATGCAGCCATACCCCTTCTTTGCAAATCAAAATCCTGGGGTCATCCCAAATCCGTGTTCAACATTCGTTCCTTATCTGGCCCCAAATACTCTTGAACATCAGTCCACGCAATATGTAACCCCCCCACCTCCTCCAGGTTGCCATTCCCATGCGTCAGGAACACAGGATTCCAGAAATAAATCATCCAGGGAGAGCAAGGTTGAAAATGATGGATGTGCTAATGATGTCACCACAGACCTGGAATTGAAAACTCCTGGATCTACGACAGATCAGGAGTTGTCATCTGGGCAAAGAAAATCCAACAAGTTGTCCGCGAAGGAAAACAATTACACAGAAGGGAGTTCATCCGGCAGGTGTTCTTCATCTCATAGCATACAGGATAGCTCATCAAGTAGCGTAGTTGGGAGCAGAAAAGCTGATGAATGA 864 0.4537 MDGTAARKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILADTIQLLKDLTSQVSKLKEEYTTLTEESQELTQEKNDLREEKASLKSDIESLNNQYQQRLRTVFPWTAMDHSVMMAPPSYPYPVPVPLAVPPGPIPMHPPMQPYPFFANQNPGVIPNPCSTFVPYLAPNTLEHQSTQYVTPPPPPGCHSHASGTQDSRNKSSRESKVENDGCANDVTTDLELKTPGSTTDQELSSGQRKSNKLSAKENNYTEGSSSGRCSSSHSIQDSSSSSVVGSRKADE 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4803g00044 287 SMART finulus 12 62 IPR011598 GO:0046983
Pral4803g00044 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 77 IPR036638 GO:0046983
Pral4803g00044 287 Gene3D - 5 89 IPR036638 GO:0046983
Pral4803g00044 287 Coils Coil 5 25 - -
Pral4803g00044 287 CDD bHLH_AtILR3_like 11 85 - -
Pral4803g00044 287 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Pral4803g00044 287 Coils Coil 46 108 - -
Pral4803g00044 287 MobiDBLite consensus disorder prediction 226 287 - -
Pral4803g00044 287 PANTHER TRANSCRIPTION FACTOR BHLH121 2 285 IPR044579 GO:0003700|GO:0006879
Pral4803g00044 287 MobiDBLite consensus disorder prediction 181 287 - -
Pral4803g00044 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4803g00044 Pral-Chr4803 191057 193838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4803g00044 4 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 62.288 3.12e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4803g00044 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4803g00044 - - cam:101491902 372.474