Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4803g00016 ATGGGAAGGTCTCCTTGCTGCGAGAAAGCTCACACTAACAAAGGAGCATGGACCAAGGAAGAAGACGATCGTCTCGTTGCTTATATTCGAGCTCACGGCGAGGGCTGCTGGCGCTCTCTCCCCAAAGCCGCCGGCCTCCTCCGTTGTGGCAAGAGCTGCCGTCTCCGCTGGATCAACTACCTCCGTCCCGACCTCAAGCGCGGCAATTTTACTGAACAAGAAGATGAGCTCATCATCAAGCTCCATAGTCTCCTTGGCAATAAGTGGTCGCTGATAGCTGGGAGATTACCGGGAAGAACTGACAACGAGATAAAGAATTACTGGAATACTCATATAAGAAGGAAGCTTCTGAGCAGAGGAATTGACCCCGCGACTCACAGGCCTCTCAACGGGGCTTCTCAGAACCAATCTCTTGCCCCATCTGCTTCTGCTGCTAAACAGCAAGAGTCGGAGATTCTGTTTTCTGATGCGAATTCCAAACGACCCGGCGTCTTAGAAGTATGCCCTGACTTGAACCTTGAGCTAACCATCAGCCTTCCCCACCACCACCATCATCAGCCGCAACCAGATCAGCCACCGCTTAAGAGCAGTAATGGAAGCGGCACGGCTGGCGATGGTTATGATTTCTTGGGATTGAAAAGCAGTGTTTTGGATTGCAGGAGCGGCGTAACCCAAATAGATTGGAGAGCACTCAGAGAATGA 702 0.5171 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEQEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNGASQNQSLAPSASAAKQQESEILFSDANSKRPGVLEVCPDLNLELTISLPHHHHHQPQPDQPPLKSSNGSGTAGDGYDFLGLKSSVLDCRSGVTQIDWRALRE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4803g00016 233 CDD SANT 69 112 IPR001005 -
Pral4803g00016 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral4803g00016 233 Gene3D - 68 152 - -
Pral4803g00016 233 CDD SANT 16 61 IPR001005 -
Pral4803g00016 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral4803g00016 233 SMART sant 66 114 IPR001005 -
Pral4803g00016 233 SMART sant 13 63 IPR001005 -
Pral4803g00016 233 FunFam Myb transcription factor 68 137 - -
Pral4803g00016 233 MobiDBLite consensus disorder prediction 181 202 - -
Pral4803g00016 233 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4803g00016 233 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pral4803g00016 233 FunFam MYB-related transcription factor 13 66 - -
Pral4803g00016 233 MobiDBLite consensus disorder prediction 128 144 - -
Pral4803g00016 233 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4803g00016 233 Gene3D - 14 66 - -
Pral4803g00016 233 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4803g00016 233 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Pral4803g00016 233 MobiDBLite consensus disorder prediction 123 144 - -
Pral4803g00016 233 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4803g00016 Pral-Chr4803 73982 75625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4803g00016 1 221 MYB Transcription Factor Family AT4G38620 56.631 9.86e-96 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4803g00016 Myb_DNA-binding 4.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4803g00016 K09422 - jre:109006592 330.102