Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00052 ATGGGAGACGGTGCAGTTTGCGTCGAATTACCTGCAGATAGAACAGATGAAAACAATGAGATATCGAGAACGGACCTGAAGCGGGACTACCAATGTCTTACTGATACTGAACTTGACCCCTCCCCAAATAAGAAGCAAGCAAAAGAAGTCTCAAACGATGACGTGCGCTCTGAGGTTTCTAATCCCAATATTTCTTCGAAAGAGAATGTATTAGCATTTCAAGATATTAGTAGCCAGCCGAGCGAGTTGGGAAATGCTAATCAAGCAGAGTGTGGAGAAGTAACGTCTACTTGTGTGGAGAATTCAAGTTCGGATGAAACCTTGAGTGATGGAGGGGGTGATCATAATACTATTTCTCAGAACGATAAGGGTGTCAGGAGTGCTGAAATGACGTCCCGTGTTGTACTGGAAATTCCCAAGCATGCCAGTACATCTGGAATCAGAAAGATTACTTTTAAGTTCAGTAAAAAGAAGGAGGACTATGATTATCGGTCACTTGCTAGTACTAATAGGAATCCTTACGACGAAGAGCCAAGTTCTGATTGCAAGTCGGGGATGCTAGAAAGATCGTGTGGGATGGAATATGTTCAAGCTGGTGATTTTAACTTGTACGCCCGAAATATGGAGCTGAAAATGTCAAAGAAAGTAGTTCCTAGCTGTTATCCTACTAATGTCAAAAAGCTGCTAGCAACTGGTATTCTTGATGGAGCTCGAGTGAAGTACATTTATACTCATAGCACGGGAAAGATTGAGCTGCCTGGGATTATTCAGGGTGGTGGCTATATGTGTGGCTGCTCGTTGTGCAGCTTCTCCAAAGTTCTAAGCGCGTACGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGGCATCCAAATAATCACATATTCCTGGAAAACGGAAAACCAATTTATAGTATTATACAGGAGATAAAAACTGCTCCACTCAGCTTATTAGACGAGGTTATAAAGAACGTTGCTGGTTCATCTGTCAATGAAGAGTCCTTCCAGGTTTGGAAAGCAAGTCTTTTGCAAAGCAATGGGCAGGTTGAGGCAGAAAGGAATTTTAACTCCAAGCTTGTTGGCATGCCTCATACAAACATAAGTGAATTTGTAGATGGTATGAGCTACATGTCCTGTTCAGATGTGCTGAGCCCTGTTGAGCAGCAAAGTTATGTGAAGCAGGCAACTGACGAGAGGAAACATGTGGTGAAAAAATCAAGCTCCCATGCTTCTAACTCAGGTCTACAGCAAAAGAAAACTGCGGATGGTTGCAATAAGAGAAGGGATAATGATTTGCATAGGCTACTTTTTATGCCAAATGGACTACCAGACGGTGCTGAATTGGCATACTATGTCAAAGGACAGAAACTACTTGGAGGTTACAAACAGGGAAATGGTATAGTTTGTGGTTGTTGCGATAGAGAGATAAGCCCTTCACAGTTTGAAGCTCATGCTGGAATGGCTGCCCGACGTCAACCGTATCGCCATATATATACTTCCAACGGATTAACACTTCATGATATAGCCCTTTCATTAGCAAATGGTCAAAACCTTACCACGGGAGATAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGGGACTTGATTCTTTGCAATGGATGCCCCAGGGCTTTTCATGCAGTTTGTTTAGGCTTACAGTGTGCTCCTGAAAGCTGTTGGCTTTGTCAAACTTGTAGAGATATTGCTGGCTGCAGCAGATTATCTTCTACAGCAAGGCCAATTAAGATAAGGTTGACCCGGGTTGTTAAAGCACCAGAATTTGAAATGGGTGGTTGTGTCGTTTGTAGGGAGCATGATTTTAGTGTCGCTAAATTTGATGAGCGAACAGTTATAATTTGTGATCAGTGTGAGAAGGAGTATCATGTTGGGTGCTTGCGGGACAGTGGGCTCTGTGAGTTGGAAGAATTGCCCAAGGACAAGTGGTTTTGTTGTGATGACTGCAATCGAATATATGTGGCCCTGCAAAATTCAGTTTCTGCTGGATCAGAGATTATACCAGCTTCCTTGTCAGTCCTAATAAATAGGAAGCGTGAGGAGAGGGGCTTACCTATTGATGGAGGAGGCATTGATGATATCCAATGGCGAATTCTAAGCGGAAAAAGTCGTTATCCAGAACATCTACCATTACTTTCTCGGGCTGCTGCAATTTTTCGAGAGTGTTTTGATCCCATTGTTGCAGTCTCTGGTCGTGACCTGATTCCTGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAGTTTGGTGGGATGTATTGTGTTGTTTTGATAGTGAAATCTGTTGTTGTATCTGCTGGACTGCTTAGGATTTTTGGAAGTCATGTTGCTGAGCTTCCAATGGTTGCTACAAGTAGAGAACATCAAGGGAAAGGTTATTTTCAAGTGTTATTCTCTTGCATAGAGAAGCTGCTGTTCTCCCTGAAGGTGGAAAAGCTAGTGCTTCCTGCAGCTGAGGATGCTGAATCCATTTGGACTAGAAAATTAGGCTTCCGAAAGCTGACTGAAGACCAGTTATCCAAATATCTCAGAGAGGTGCAGCTCACCCTCTTTAACAAGACTTCGATGCTGGAGAAGACAGTGCAGCTGGCGATGGAATGA 2616 0.4323 MGDGAVCVELPADRTDENNEISRTDLKRDYQCLTDTELDPSPNKKQAKEVSNDDVRSEVSNPNISSKENVLAFQDISSQPSELGNANQAECGEVTSTCVENSSSDETLSDGGGDHNTISQNDKGVRSAEMTSRVVLEIPKHASTSGIRKITFKFSKKKEDYDYRSLASTNRNPYDEEPSSDCKSGMLERSCGMEYVQAGDFNLYARNMELKMSKKVVPSCYPTNVKKLLATGILDGARVKYIYTHSTGKIELPGIIQGGGYMCGCSLCSFSKVLSAYEFEQHAGAKTRHPNNHIFLENGKPIYSIIQEIKTAPLSLLDEVIKNVAGSSVNEESFQVWKASLLQSNGQVEAERNFNSKLVGMPHTNISEFVDGMSYMSCSDVLSPVEQQSYVKQATDERKHVVKKSSSHASNSGLQQKKTADGCNKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAVCLGLQCAPESCWLCQTCRDIAGCSRLSSTARPIKIRLTRVVKAPEFEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVGCLRDSGLCELEELPKDKWFCCDDCNRIYVALQNSVSAGSEIIPASLSVLINRKREERGLPIDGGGIDDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAVSGRDLIPVMVYGRNISGQEFGGMYCVVLIVKSVVVSAGLLRIFGSHVAELPMVATSREHQGKGYFQVLFSCIEKLLFSLKVEKLVLPAAEDAESIWTRKLGFRKLTEDQLSKYLREVQLTLFNKTSMLEKTVQLAME 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00052 871 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 750 841 IPR016181 -
Pral4800g00052 871 PANTHER AUTOIMMUNE REGULATOR 15 865 - -
Pral4800g00052 871 MobiDBLite consensus disorder prediction 41 55 - -
Pral4800g00052 871 MobiDBLite consensus disorder prediction 13 34 - -
Pral4800g00052 871 Gene3D - 698 865 - -
Pral4800g00052 871 MobiDBLite consensus disorder prediction 96 128 - -
Pral4800g00052 871 ProSitePatterns Zinc finger PHD-type signature. 526 565 IPR019786 -
Pral4800g00052 871 MobiDBLite consensus disorder prediction 1 66 - -
Pral4800g00052 871 SUPERFAMILY FYVE/PHD zinc finger 597 652 IPR011011 -
Pral4800g00052 871 ProSitePatterns Zinc finger PHD-type signature. 599 654 IPR019786 -
Pral4800g00052 871 MobiDBLite consensus disorder prediction 401 425 - -
Pral4800g00052 871 SUPERFAMILY FYVE/PHD zinc finger 511 566 IPR011011 -
Pral4800g00052 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 657 IPR013083 -
Pral4800g00052 871 FunFam PHD zinc finger protein 597 657 - -
Pral4800g00052 871 SMART PHD_3 525 566 IPR001965 -
Pral4800g00052 871 SMART PHD_3 598 655 IPR001965 -
Pral4800g00052 871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 513 590 IPR013083 -
Pral4800g00052 871 MobiDBLite consensus disorder prediction 96 127 - -
Pral4800g00052 871 Pfam Tify domain binding domain 459 508 IPR032308 -
Pral4800g00052 871 Pfam Tify domain binding domain 254 308 IPR032308 -
Pral4800g00052 871 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 708 858 IPR000182 GO:0016747
Pral4800g00052 871 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 513 591 - -
Pral4800g00052 871 ProSiteProfiles Zinc finger PHD-type profile. 596 657 IPR019787 -
Pral4800g00052 871 ProSiteProfiles Zinc finger PHD-type profile. 523 568 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4800g00052 Pral-Chr4800 267721 276409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00052 1 866 PHD Transcription Factor Family AT3G53680 54.360 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4800g00052 - - gmx:100808999 1342.41