Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00039 ATGGAAGGTAATTCTTCGCCAAGAAGAGAGTTGAGGGCACTGGTTGTTGACGATCAAGAAATGCTGAGGAGGATCCATGAGAGAATGCTGAACAGCGTTGGAGTGACAAACGTCGAGACTGTCGAAAATGGCCAGGAAGCCATCAACATTCACAGAGCAGGCCGAAGTTTTGATCTAATTCTCATGGACTTGGACATGCCCATCATGAACGGCATCGAGGCGACGAGGGGTCTTCGAGCAATGGGGATCAGAAGCAAGATCGCAGGCGTATCAGCAAGAAGCGAAGAAGCAAGACTTGAAGAATTCATGAAAGCTGGCATCGATCTCTTCCTTCACAAACCCTTAACTTCTCCTGACCTCTCTTCACTTGTTCGCAGTATCAACCCTCTTTGA 393 0.4809 MEGNSSPRRELRALVVDDQEMLRRIHERMLNSVGVTNVETVENGQEAINIHRAGRSFDLILMDLDMPIMNGIEATRGLRAMGIRSKIAGVSARSEEARLEEFMKAGIDLFLHKPLTSPDLSSLVRSINPL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00039 130 ProSiteProfiles Response regulatory domain profile. 12 128 IPR001789 GO:0000160
Pral4800g00039 130 Pfam Response regulator receiver domain 14 124 IPR001789 GO:0000160
Pral4800g00039 130 SMART REC_2 11 124 IPR001789 GO:0000160
Pral4800g00039 130 Gene3D - 1 129 - -
Pral4800g00039 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 127 - -
Pral4800g00039 130 SUPERFAMILY CheY-like 10 127 IPR011006 -
Pral4800g00039 130 CDD REC_hyHK_CKI1_RcsC-like 14 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4800g00039 Pral-Chr4800 194029 194527 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00039 8 124 Response Regulator Gene Family AT3G04280 41.667 6.62e-24 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4800g00039 Response_reg 2.4e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4800g00039 - - rcu:8262779 139.428