Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00019 ATGCAGTCCTGTCCATTAGTTATCCAGTTGATATCAGGGATCCCATCATCACCACCATATGGAAGCTATGTTGGAAGTGGTCCTAGCGGGAGTGCTGGTGGTCTTCCAATCACTGCCAACTTTGTCAACAAGAGCCAGAAAATGAATCTTAGAACCATATTCATCATTGCTCTATCTGCCTTTGTGCTCATGTTGGTTTTGATTGGAGCATTTTCCATCGTGTTGAAATGGAGGAAGATAAGGAACCCATCAAGTGCCGTTGGTCCTGCATTTACTTCATCTATAAACAAGCGATTTGGCATGGGGTCTATGTTGTCAAGCAGCATTACAAGCTCAACATCAGTGTCCCTTATGTCTACCATGGCTACTTCTGTTCTCTCTGTTAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTACTAGGAGAAGGGGGATTTGGCCGTGTTTATAGTGGGATTTTGGACGATGGAACTGAAGTTGCAGTTAAGTTGCTAACGAAAGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGGAATCTTGTGAAGCTCATTGGTATCTGCATTGAAGGGCGTAGACGGTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCACATTTGCACTGCGTTGACAAGAAGGGACCTCTTGATTGGGAAGCAAGGATGAAAATTGCTCTTGGAGCAGCAAGAGGGCTGGCCTATCTTCATGAGGACTCTAATCCTCGTGTAATTCATCGAGATTTCAAAGCCAGTAATGTGTTACTAGAAGATGATTTCACCCCCAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGTAGTCATCATATTTCTACTCGTGTCATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAGAGTGATGTTTATAGTTATGGGGTAGTCCTGCTTGAACTTCTTACTGGGAGAAAACCGGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGTAGGGAAGGTTTGGAACAGCTAGTGGATCCATCTTTAGCTGGAAGTTATGATTTTGATGACATAGCAAAGGTGGCCGCCATTGCCTCCATGTGTGTCCACCCTGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTGAAATTGATATACAATGACACAGACGAGACTTGCGGGGATTGCTGTAGTCACAAGGAGTCTTCTGCTCAGGAGTCTGACATTAGAGCCGATCTTGCTCATTCAGAAGGCAGTTGGTGGAATGCGGGAGGGGTGACCCCAAGGTTAACTTACGGCCAAGCATCTTCTTTCATCACGATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTATTGGGAGACGAGATATCTTCACCGATTAGGCATGGGAACAGATCGGGGCCCTTGAGATCAGTCCGAAGCAAGCTATCTTTGTATAGATTTACCGGAAGTCGGAGTGAACATGGGGGACTTCCTTCCAAGCGTGGTTCAAACGATGGTTACTGGGTTTAA 1638 0.4524 MQSCPLVIQLISGIPSSPPYGSYVGSGPSGSAGGLPITANFVNKSQKMNLRTIFIIALSAFVLMLVLIGAFSIVLKWRKIRNPSSAVGPAFTSSINKRFGMGSMLSSSITSSTSVSLMSTMATSVLSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGILDDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHCVDKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDIAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDCCSHKESSAQESDIRADLAHSEGSWWNAGGVTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEISSPIRHGNRSGPLRSVRSKLSLYRFTGSRSEHGGLPSKRGSNDGYWV 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00019 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Pral4800g00019 545 CDD STKc_IRAK 149 417 - -
Pral4800g00019 545 ProSiteProfiles Protein kinase domain profile. 143 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4800g00019 545 PANTHER OS01G0750732 PROTEIN 13 439 - -
Pral4800g00019 545 Gene3D Transferase(Phosphotransferase) domain 1 219 439 - -
Pral4800g00019 545 Pfam Protein tyrosine and serine/threonine kinase 145 413 IPR001245 GO:0004672|GO:0006468
Pral4800g00019 545 FunFam Receptor-like serine/threonine-protein kinase ALE2 219 436 - -
Pral4800g00019 545 Gene3D Phosphorylase Kinase; domain 1 114 218 - -
Pral4800g00019 545 SUPERFAMILY Protein kinase-like (PK-like) 127 415 IPR011009 -
Pral4800g00019 545 FunFam receptor-like serine/threonine-protein kinase ALE2 116 218 - -
Pral4800g00019 545 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4800g00019 Pral-Chr4800 77716 80989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00019 13 531 Receptor kinase-like Gene Family AT5G56890 55.453 5.74e-168 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral4800g00019 PK_Tyr_Ser-Thr 6.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4800g00019 - - pvu:PHAVU_001G1677000 892.878