Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00018 ATGAAAGTCAAACTTGTTTTGGATGTCGCACCTTATGCAATTTTCCCCTTAATGAATCAGTTAGAGATTGAGGTTGCATCAGGCACATATTTGGAACAGAGCCAGGTGAAGATTATGGGTGCAAGTGCTGACAGTCAAAATCAGGGAAGAACTGTAGTTGATATGAACTTGGTTCCATTGGGAGAGAAGTTTGACAACACCACTGCGGTTCTGATATTTGAGAGGTTTTGGCATAAGAAAGTTCCTCTAGATAAGAACCTTTTTGGTGATTATGCAGTCCTGTCCATTAGTTATCCAGGGATCCCATCATCACCACCATATGGAAGCTATGTTGGAAGTGGTCCTAGCGGGAGTGCTGGTGGTCTTCCAATCACTGCCAACTTTGTCAACAAGAGCCAGAAAATGAATCTTAGAACCATATTCATCATTGCTCTATCTGCCTTTGTGCTCATGTTGGTTTTGATTGGAGCATTTTCCATCGTGTTGAAATGGAGGAAGATAAGGAACCCATCAAGTGCCGTTGGTCCTGCATTTACTTCATCTATAAACAAGCGATTTGGCATGGGGTCTATGTTGTCAAGCAGCATTACAAGCTCAACATCAGTGTCCCTTATGTCTACCATGGCTACTTCTGTTCTCTCTGTTAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTACTAGGAGAAGGGGGATTTGGCCGTGTTTATAGTGGGATTTTGGACGATGGAACTGAAGTTGCAGTTAAGTTGCTAACGAAAGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGGAATCTTGTGAAGCTCATTGGTATCTGCATTGAAGGGCGTAGACGGTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCACATTTGCACTGCGTTGACAAGAAGGGACCTCTTGATTGGGAAGCAAGGATGAAAATTGCTCTTGGAGCAGCAAGAGGGCTGGCCTATCTTCATGAGGACTCTAATCCTCGTGTAATTCATCGAGATTTCAAAGCCAGTAATGTGTTACTAGAAGATGATTTCACCCCCAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGTAGTCATCATATTTCTACTCGTGTCATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAGAGTGATGTTTATAGTTATGGGGTAGTCCTGCTTGAACTTCTTACTGGGAGAAAACCGGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGTAGGGAAGGTTTGGAACAGCTAGTGGATCCATCTTTAGCTGGAAGTTATGATTTTGATGACATAGCAAAGGTGGCCGCCATTGCCTCCATGTGTGTCCACCCTGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTGAAATTGATATACAATGACACAGACGAGACTTGCGGGGATTGCTGTAGTCACAAGGAGTCTTCTGCTCAGGAGTCTGACATTAGAGCCGATCTTGCTCATTCAGAAGGCAGTTGGTGGAATGCGGGAGGGGTGACCCCAAGGTTAACTTACGGCCAAGCATCTTCTTTCATCACGATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTATTGGGAGACGAGATATCTTCACCGATTAGGCATGGGAACAGATCGGGGCCCTTGAGATCAGTCCGAAGCAAGCTATCTTTGTATAGATTTACCGGAAGTCGGAGTGAACATGGGGGACTTCCTTCCAAGCGTGGTTCAAACGATGGTTACTGGGTTTAA 1899 0.446 MKVKLVLDVAPYAIFPLMNQLEIEVASGTYLEQSQVKIMGASADSQNQGRTVVDMNLVPLGEKFDNTTAVLIFERFWHKKVPLDKNLFGDYAVLSISYPGIPSSPPYGSYVGSGPSGSAGGLPITANFVNKSQKMNLRTIFIIALSAFVLMLVLIGAFSIVLKWRKIRNPSSAVGPAFTSSINKRFGMGSMLSSSITSSTSVSLMSTMATSVLSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGILDDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHCVDKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDIAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDCCSHKESSAQESDIRADLAHSEGSWWNAGGVTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEISSPIRHGNRSGPLRSVRSKLSLYRFTGSRSEHGGLPSKRGSNDGYWV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00018 632 FunFam Receptor-like serine/threonine-protein kinase ALE2 306 523 - -
Pral4800g00018 632 CDD STKc_IRAK 236 504 - -
Pral4800g00018 632 ProSitePatterns Protein kinases ATP-binding region signature. 236 258 IPR017441 GO:0005524
Pral4800g00018 632 FunFam receptor-like serine/threonine-protein kinase ALE2 203 305 - -
Pral4800g00018 632 Pfam Protein tyrosine and serine/threonine kinase 232 500 IPR001245 GO:0004672|GO:0006468
Pral4800g00018 632 SUPERFAMILY Protein kinase-like (PK-like) 214 502 IPR011009 -
Pral4800g00018 632 Gene3D Transferase(Phosphotransferase) domain 1 306 526 - -
Pral4800g00018 632 PANTHER OS01G0750732 PROTEIN 1 526 - -
Pral4800g00018 632 Gene3D Phosphorylase Kinase; domain 1 201 305 - -
Pral4800g00018 632 ProSiteProfiles Protein kinase domain profile. 230 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4800g00018 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4800g00018 Pral-Chr4800 74067 80989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00018 1 618 Receptor kinase-like Gene Family AT5G56890 54.062 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral4800g00018 PK_Tyr_Ser-Thr 9.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4800g00018 - - pvu:PHAVU_001G1677000 1041.95