Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00017 ATGAAAGTCAAACTTGTTTTGGATGTCGCACCTTATGCAATTTTCCCCTTAATGAATCAGTTAGAGATTGAGGTTGCATCAGGCACATATTTGGAACAGAGCCAGGTGAAGATTATGGGTGCAAGTGCTGACAGTCAAAATCAGGGAAGAACTGTAGTTGATATGAACTTGGTTCCATTGGGAGAGAAGTTTGACAACACCACTGCGGTTCTGATATTTGAGAGGTTTTGGCATAAGAAAGTTCCTCTAGATAAGAACCTTTTTGGTGATTATGCAGTCCTGTCCATTAGTTATCCAGGTAGGATCCCATCATCACCACCATATGGAAGCTATGTTGGAAGTGGTCCTAGCGGGAGTGCTGGTGGTCTTCCAATCACTGCCAACTTTGTCAACAAGAGCCAGAAAATGAATCTTAGAACCATATTCATCATTGCTCTATCTGCCTTTGTGCTCATGTTGGTTTTGATTGGAGCATTTTCCATCGTGTTGAAATGGAGGAAGATAAGGAACCCATCAAGTGCCGTTGGTCCTGCATTTACTTCATCTATAAACAAGCGATTTGGCATGGGGTCTATGTTGTCAAGCAGCATTACAAGCTCAACATCAGTGTCCCTTATGTCTACCATGGCTACTTCTGTTCTCTCTGTTAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTACTAGGAGAAGGGGGATTTGGCCGTGTTTATAGTGGGATTTTGGACGATGGAACTGAAGTTGCAGTTAAGTTGCTAACGAAAGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGGAATCTTGTGAAGCTCATTGGTATCTGCATTGAAGGGCGTAGACGGTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCACATTTGCACTGCGTTGACAAGAAGGGACCTCTTGATTGGGAAGCAAGGATGAAAATTGCTCTTGGAGCAGCAAGAGGGCTGGCCTATCTTCATGAGGACTCTAATCCTCGTGTAATTCATCGAGATTTCAAAGCCAGTAATGTGTTACTAGAAGATGATTTCACCCCCAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGTAGTCATCATATTTCTACTCGTGTCATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAGAGTGATGTTTATAGTTATGGGGTAGTCCTGCTTGAACTTCTTACTGGGAGAAAACCGGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGTAGGGAAGGTTTGGAACAGCTAGTGGATCCATCTTTAGCTGGAAGTTATGATTTTGATGACATAGCAAAGGTGGCCGCCATTGCCTCCATGTGTGTCCACCCTGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTGAAATTGATATACAATGACACAGACGAGACTTGCGGGGATTGCTGTAGTCACAAGGAGTCTTCTGCTCAGGAGTCTGACATTAGAGCCGATCTTGCTCATTCAGAAGGCAGTTGGTGGAATGCGGGAGGGGTGACCCCAAGGTTAACTTACGGCCAAGCATCTTCTTTCATCACGATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTATTGGGAGACGAGATATCTTCACCGATTAGGCATGGGAACAGATCGGGGCCCTTGAGATCAGTCCGAAGCAAGCTATCTTTGTATAGATTTACCGGAAGTCGGAGTGAACATGGGGGACTTCCTTCCAAGCGTGGTTCAAACGATGGTTACTGGGTTTAA 1902 0.4458 MKVKLVLDVAPYAIFPLMNQLEIEVASGTYLEQSQVKIMGASADSQNQGRTVVDMNLVPLGEKFDNTTAVLIFERFWHKKVPLDKNLFGDYAVLSISYPGRIPSSPPYGSYVGSGPSGSAGGLPITANFVNKSQKMNLRTIFIIALSAFVLMLVLIGAFSIVLKWRKIRNPSSAVGPAFTSSINKRFGMGSMLSSSITSSTSVSLMSTMATSVLSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGILDDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHCVDKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDIAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDCCSHKESSAQESDIRADLAHSEGSWWNAGGVTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEISSPIRHGNRSGPLRSVRSKLSLYRFTGSRSEHGGLPSKRGSNDGYWV 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00017 633 Pfam Protein tyrosine and serine/threonine kinase 233 501 IPR001245 GO:0004672|GO:0006468
Pral4800g00017 633 FunFam receptor-like serine/threonine-protein kinase ALE2 204 306 - -
Pral4800g00017 633 ProSiteProfiles Protein kinase domain profile. 231 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4800g00017 633 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Pral4800g00017 633 SUPERFAMILY Protein kinase-like (PK-like) 215 503 IPR011009 -
Pral4800g00017 633 Gene3D Phosphorylase Kinase; domain 1 202 306 - -
Pral4800g00017 633 PANTHER OS01G0750732 PROTEIN 1 527 - -
Pral4800g00017 633 CDD STKc_IRAK 237 505 - -
Pral4800g00017 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Pral4800g00017 633 Gene3D Transferase(Phosphotransferase) domain 1 307 527 - -
Pral4800g00017 633 FunFam Receptor-like serine/threonine-protein kinase ALE2 307 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4800g00017 Pral-Chr4800 74066 80989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00017 1 619 Receptor kinase-like Gene Family AT5G56890 53.978 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral4800g00017 PK_Tyr_Ser-Thr 9.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4800g00017 - - pvu:PHAVU_001G1677000 1049.27