Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00016 ATGAAAGTCAAACTTGTTTTGGATGTCGCACCTTATGCAATTTTCCCCTTAATGAATCAGTTAGAGATTGAGGTTGCATCAGGCACATATTTGGAACAGAGCCAGGTGAAGATTATGGGTGCAAGTGCTGACAGTCAAAATCAGGGAAGAACTGTAGTTGATATGAACTTGGTTCCATTGGGAGAGAAGTTTGACAACACCACTGCGGTTCTGATATTTGAGAGGTTTTGGCATAAGAAAGTTCCTCTAGATAAGAACCTTTTTGAATTGAAGCAGTTGATATCAGGGATCCCATCATCACCACCATATGGAAGCTATGTTGGAAGTGGTCCTAGCGGGAGTGCTGGTGGTCTTCCAATCACTGCCAACTTTGTCAACAAGAGCCAGAAAATGAATCTTAGAACCATATTCATCATTGCTCTATCTGCCTTTGTGCTCATGTTGGTTTTGATTGGAGCATTTTCCATCGTGTTGAAATGGAGGAAGATAAGGAACCCATCAAGTGCCGTTGGTCCTGCATTTACTTCATCTATAAACAAGCGATTTGGCATGGGGTCTATGTTGTCAAGCAGCATTACAAGCTCAACATCAGTGTCCCTTATGTCTACCATGGCTACTTCTGTTCTCTCTGTTAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTACTAGGAGAAGGGGGATTTGGCCGTGTTTATAGTGGGATTTTGGACGATGGAACTGAAGTTGCAGTTAAGTTGCTAACGAAAGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGGAATCTTGTGAAGCTCATTGGTATCTGCATTGAAGGGCGTAGACGGTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCACATTTGCACTGCGTTGACAAGAAGGGACCTCTTGATTGGGAAGCAAGGATGAAAATTGCTCTTGGAGCAGCAAGAGGGCTGGCCTATCTTCATGAGGACTCTAATCCTCGTGTAATTCATCGAGATTTCAAAGCCAGTAATGTGTTACTAGAAGATGATTTCACCCCCAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGTAGTCATCATATTTCTACTCGTGTCATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAGAGTGATGTTTATAGTTATGGGGTAGTCCTGCTTGAACTTCTTACTGGGAGAAAACCGGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGTAGGGAAGGTTTGGAACAGCTAGTGGATCCATCTTTAGCTGGAAGTTATGATTTTGATGACATAGCAAAGGTGGCCGCCATTGCCTCCATGTGTGTCCACCCTGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTGAAATTGATATACAATGACACAGACGAGACTTGCGGGGATTGCTGTAGTCACAAGGAGTCTTCTGCTCAGGAGTCTGACATTAGAGCCGATCTTGCTCATTCAGAAGGCAGTTGGTGGAATGCGGGAGGGGTGACCCCAAGGTTAACTTACGGCCAAGCATCTTCTTTCATCACGATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTATTGGGAGACGAGATATCTTCACCGATTAGGCATGGGAACAGATCGGGGCCCTTGAGATCAGTCCGAAGCAAGCTATCTTTGTATAGATTTACCGGAAGTCGGAGTGAACATGGGGGACTTCCTTCCAAGCGTGGTTCAAACGATGGTTACTGGGTTTAA 1887 0.4452 MKVKLVLDVAPYAIFPLMNQLEIEVASGTYLEQSQVKIMGASADSQNQGRTVVDMNLVPLGEKFDNTTAVLIFERFWHKKVPLDKNLFELKQLISGIPSSPPYGSYVGSGPSGSAGGLPITANFVNKSQKMNLRTIFIIALSAFVLMLVLIGAFSIVLKWRKIRNPSSAVGPAFTSSINKRFGMGSMLSSSITSSTSVSLMSTMATSVLSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGILDDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHCVDKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDIAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDCCSHKESSAQESDIRADLAHSEGSWWNAGGVTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEISSPIRHGNRSGPLRSVRSKLSLYRFTGSRSEHGGLPSKRGSNDGYWV 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00016 628 PANTHER OS01G0750732 PROTEIN 1 522 - -
Pral4800g00016 628 SUPERFAMILY Protein kinase-like (PK-like) 210 498 IPR011009 -
Pral4800g00016 628 ProSiteProfiles Protein kinase domain profile. 226 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4800g00016 628 ProSitePatterns Protein kinases ATP-binding region signature. 232 254 IPR017441 GO:0005524
Pral4800g00016 628 CDD STKc_IRAK 232 500 - -
Pral4800g00016 628 Gene3D Phosphorylase Kinase; domain 1 197 301 - -
Pral4800g00016 628 Gene3D Transferase(Phosphotransferase) domain 1 302 522 - -
Pral4800g00016 628 Pfam Protein tyrosine and serine/threonine kinase 228 496 IPR001245 GO:0004672|GO:0006468
Pral4800g00016 628 FunFam receptor-like serine/threonine-protein kinase ALE2 199 301 - -
Pral4800g00016 628 FunFam Receptor-like serine/threonine-protein kinase ALE2 302 519 - -
Pral4800g00016 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4800g00016 Pral-Chr4800 74065 80989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00016 1 614 Receptor kinase-like Gene Family AT5G56890 53.438 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral4800g00016 PK_Tyr_Ser-Thr 9.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4800g00016 - - pvu:PHAVU_001G1677000 1024.23