Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00015 ATGGGTGCAAGTGCTGACAGTCAAAATCAGGGAAGAACTGTAGTTGATATGAACTTGGTTCCATTGGGAGAGAAGTTTGACAACACCACTGCGGTTCTGATATTTGAGAGGTTTTGGCATAAGAAAGTTCCTCTAGATAAGAACCTTTTTGGTGATTATGCAGTCCTGTCCATTAGTTATCCAGGTAGGATCCCATCATCACCACCATATGGAAGCTATGTTGGAAGTGGTCCTAGCGGGAGTGCTGGTGGTCTTCCAATCACTGCCAACTTTGTCAACAAGAGCCAGAAAATGAATCTTAGAACCATATTCATCATTGCTCTATCTGCCTTTGTGCTCATGTTGGTTTTGATTGGAGCATTTTCCATCGTGTTGAAATGGAGGAAGATAAGGAACCCATCAAGTGCCGTTGGTCCTGCATTTACTTCATCTATAAACAAGCGATTTGGCATGGGGTCTATGTTGTCAAGCAGCATTACAAGCTCAACATCAGTGTCCCTTATGTCTACCATGGCTACTTCTGTTCTCTCTGTTAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTACTAGGAGAAGGGGGATTTGGCCGTGTTTATAGTGGGATTTTGGACGATGGAACTGAAGTTGCAGTTAAGTTGCTAACGAAAGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGGAATCTTGTGAAGCTCATTGGTATCTGCATTGAAGGGCGTAGACGGTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCACATTTGCACTGCGTTGACAAGAAGGGACCTCTTGATTGGGAAGCAAGGATGAAAATTGCTCTTGGAGCAGCAAGAGGGCTGGCCTATCTTCATGAGGACTCTAATCCTCGTGTAATTCATCGAGATTTCAAAGCCAGTAATGTGTTACTAGAAGATGATTTCACCCCCAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGTAGTCATCATATTTCTACTCGTGTCATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAGAGTGATGTTTATAGTTATGGGGTAGTCCTGCTTGAACTTCTTACTGGGAGAAAACCGGTGGACATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGTAGGGAAGGTTTGGAACAGCTAGTGGATCCATCTTTAGCTGGAAGTTATGATTTTGATGACATAGCAAAGGTGGCCGCCATTGCCTCCATGTGTGTCCACCCTGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTGAAATTGATATACAATGACACAGACGAGACTTGCGGGGATTGCTGTAGTCACAAGGAGTCTTCTGCTCAGGAGTCTGACATTAGAGCCGATCTTGCTCATTCAGAAGGCAGTTGGTGGAATGCGGGAGGGGTGACCCCAAGGTTAACTTACGGCCAAGCATCTTCTTTCATCACGATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTATTGGGAGACGAGATATCTTCACCGATTAGGCATGGGAACAGATCGGGGCCCTTGAGATCAGTCCGAAGCAAGCTATCTTTGTATAGATTTACCGGAAGTCGGAGTGAACATGGGGGACTTCCTTCCAAGCGTGGTTCAAACGATGGTTACTGGGTTTAA 1788 0.4491 MGASADSQNQGRTVVDMNLVPLGEKFDNTTAVLIFERFWHKKVPLDKNLFGDYAVLSISYPGRIPSSPPYGSYVGSGPSGSAGGLPITANFVNKSQKMNLRTIFIIALSAFVLMLVLIGAFSIVLKWRKIRNPSSAVGPAFTSSINKRFGMGSMLSSSITSSTSVSLMSTMATSVLSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGILDDGTEVAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHCVDKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDIAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDCCSHKESSAQESDIRADLAHSEGSWWNAGGVTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEISSPIRHGNRSGPLRSVRSKLSLYRFTGSRSEHGGLPSKRGSNDGYWV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00015 595 FunFam Receptor-like serine/threonine-protein kinase ALE2 269 486 - -
Pral4800g00015 595 ProSitePatterns Protein kinases ATP-binding region signature. 199 221 IPR017441 GO:0005524
Pral4800g00015 595 Pfam Protein tyrosine and serine/threonine kinase 195 463 IPR001245 GO:0004672|GO:0006468
Pral4800g00015 595 PANTHER OS01G0750732 PROTEIN 1 489 - -
Pral4800g00015 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Pral4800g00015 595 Gene3D Transferase(Phosphotransferase) domain 1 269 489 - -
Pral4800g00015 595 FunFam receptor-like serine/threonine-protein kinase ALE2 166 268 - -
Pral4800g00015 595 ProSiteProfiles Protein kinase domain profile. 193 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4800g00015 595 SUPERFAMILY Protein kinase-like (PK-like) 177 465 IPR011009 -
Pral4800g00015 595 CDD STKc_IRAK 199 467 - -
Pral4800g00015 595 Gene3D Phosphorylase Kinase; domain 1 164 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4800g00015 Pral-Chr4800 70506 80989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00015 1 581 Receptor kinase-like Gene Family AT5G56890 55.058 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral4800g00015 PK_Tyr_Ser-Thr 8.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4800g00015 - - pvu:PHAVU_001G1677000 992.645