Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00012 ATGACTGCTCTCACATGTTCCGCCGCTGATCTCCACTCTCTTCTTGCTGAAACAGCCAATTCTTCTGCCGCCGCCGATTACATTTGTAAACGTTTCGAAGATATTTCCAACGAGTTTGTTGCTACCGCCTATGCCGTCGATAACACCTACCTTCTCTTTTCCGCCTACCTTGTATTTGCGATGCAGCTTGGCTTCGCTATGCTCTGTGCTGGCTCTGTGCGAGCCAAGAACACCATGAATATTATGCTCACGAATGTGCTTGACGCTTCGACTGGTGGCATTTTCTATTACCTTTTCGGATTCGCCTTGTCTTATGGTTCACCATCAAATGGGTTCATTGGGCAACACTTTTTCGGCCTCGAAAAGTTCCCTTCGCCATCTTTTGATTACGGGTATTTTCTCTACCAATGGGCGTTTGCCATCGCCGCCGCTGGAATCACCAGCGGTTCCATTGCGGAGAGAACCCAGTTCGTCGCCTATTTGATTTATTCATCATTCTTAACAGGATTGGTCTATCCCATAGTCTCTCACTGGTTCTGGTCTGCGGATGGTTGGGGCAGCCCTTCTCGCTCTCACAATCTCTTATTTGGATCCGGGGTCATCGATTTCGCAGGCTCCGGCGTCGTCCACTTGGTGGGCGCCGTCGCCGGCTTCTGGGGTGCCTTTATCGAAGGCCCACGTATAGGCAGATTCGATCACGAAGGAAAACCTGTGGCCATGCGAGGGCACAGCGGAACCTTGGTTGTCCTTGGCACATTCTTGTTATGGTTTGGATGGTACGGATTCAACCCAGGATCCTTCCTCACAATCACGAAGACCTATAACGCTTCAGGTTCATACTACGGGCAATGGAGTGCGATCGGTAGAACAGCCGTGACCACAACACTGGCCGGTTGCGCGGCGGCGCTGACCACCCTGTTCGGCAAACGCCTTCTGAGTGGACACTGGAATGTGACAGACGTGTGCAATGGACTCCTGGGAGGATTCGCAGCCATAACCTCAGGTTGCTCCGTGGTTGACCCATGGGCAGCAATCTTGTGCGGGTTTGTGGCGGCTTGGGTGCTCATTGGCTTCAACGTTGTAGCAGAAAAGTTGAAGTACGATGATCCATTGGAGGCTGCACAGCTTCATGGAGGTTGTGGGGCATGGGGCATAATCTTCACAGCACTATTTGCAAGAAAAGAGTATGTGAACGAGGTATATCCAGGGGTTCCTGGTAGGCCATATGGTTTGTTGATGGGAGGAGGAGGGAAGCTATTGGGAGCACACGTTGTTCAGATTTTGGTGATCCTGGCTTGGGTTAGTGTTACTATGGGAACGCTCTTCTTCTTGCTTCATAAATTGAAGCTTTTGAGGATCTCACCCGATGAGGAAATGGCTGGATTGGATGTTACTAGCCATGGTGGATTGGCTTATGTGTATAATAACGAGGAGATGGAGCTTGCTCAAAAAAGCGCATTTGGGGCCATGAGGATGGGATCTTCCGCCGTTTAA 1494 0.5067 MTALTCSAADLHSLLAETANSSAAADYICKRFEDISNEFVATAYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDASTGGIFYYLFGFALSYGSPSNGFIGQHFFGLEKFPSPSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVSHWFWSADGWGSPSRSHNLLFGSGVIDFAGSGVVHLVGAVAGFWGAFIEGPRIGRFDHEGKPVAMRGHSGTLVVLGTFLLWFGWYGFNPGSFLTITKTYNASGSYYGQWSAIGRTAVTTTLAGCAAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITSGCSVVDPWAAILCGFVAAWVLIGFNVVAEKLKYDDPLEAAQLHGGCGAWGIIFTALFARKEYVNEVYPGVPGRPYGLLMGGGGKLLGAHVVQILVILAWVSVTMGTLFFLLHKLKLLRISPDEEMAGLDVTSHGGLAYVYNNEEMELAQKSAFGAMRMGSSAV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00012 497 PANTHER AMMONIUM TRANSPORTER 17 468 - -
Pral4800g00012 497 NCBIfam ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pral4800g00012 497 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pral4800g00012 497 Gene3D Ammonium transporter AmtB like domains 26 489 IPR029020 -
Pral4800g00012 497 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pral4800g00012 497 FunFam Ammonium transporter 28 487 - -
Pral4800g00012 497 SUPERFAMILY Ammonium transporter 44 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4800g00012 Pral-Chr4800 57732 59650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00012 4 478 Inorganic Solute Cotransporters AT4G13510 74.790 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4800g00012 K03320 - cave:132166278 816.609