Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00011 ATGGGTAAAAAACATTATTCTGATGCTATTGATTGTTACACAAGGGCAATAAATCAGCAAGTCTTGAGCGACTCAGAGAACTCAGTTCTTTTGGCAAATAGAGCACATGTAAATTTGCTGCTAGGAAATTATAGACGTGCTCTAACGGATGCGGAGGAGGCAATTAAGTCGTGCCCCTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCATCTCTTTCATTAAATTTGTTGGCTGAAGCTCAATCTCACTGTCGAAACGGCCTTCAGTTGGACCCAAATAATGAAGAATTGAAGAAGCTTGGCGAACAGGTTGATCTAAAGAAAGCAGAAGAGGACAAGCGTGAAGCTGAAGTCTCCAAAGCTGTTGCAGGGGCAAAGGAACTTGTGTCGGCAATAGAAAGTAGAAGCTTGAAGATTGGGAAGGCAATGTTTCAAGAGCTTACCGGACTTAAAAAACCGGTATTAGACAAAAATAATATTCTTCATTGGCCTGTTCTTCTCCTGTATGCAGAGGTTATGTCTAGTGACTTCATTGAAGATTTCTGTGAGACTGACATGTTTTCAGCTCATCTTGATATGATGTTTGCAGAAGATCAGCCTTTGCCATGGGATGATCAAAACAATTACAAACGTGAATTCATTGAATTATACTATGAGGCTGGTTCTGGAGTTTGTCTCTCAAAGGCAAAACTTCTTCATTGTTTATTAGAGGGAACTGCAGCATCTCAGCATGAAAGTTTCGGCGATGAAGAGAAAGATGCAGCTCATGGTACTAACCATGTCAACACAGGCGCTCCTAAATGGGTCAAAGTAAATGAAATGACGACGCTCCATGATGTTCTGAAGGACCCCAATTTTATTATCCCTGGCATCCCAGTATTCTATGTTGTTTCAAAGCGATCCAGCTTTTATGGCAAGTTCAAAGCTGGAAAATGGGCTCCCCCAAGCGTATGA 957 0.4117 MGKKHYSDAIDCYTRAINQQVLSDSENSVLLANRAHVNLLLGNYRRALTDAEEAIKSCPSNIKAIYRAAKASLSLNLLAEAQSHCRNGLQLDPNNEELKKLGEQVDLKKAEEDKREAEVSKAVAGAKELVSAIESRSLKIGKAMFQELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFSAHLDMMFAEDQPLPWDDQNNYKREFIELYYEAGSGVCLSKAKLLHCLLEGTAASQHESFGDEEKDAAHGTNHVNTGAPKWVKVNEMTTLHDVLKDPNFIIPGIPVFYVVSKRSSFYGKFKAGKWAPPSV 318
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00011 318 SUPERFAMILY TPR-like 3 100 IPR011990 GO:0005515
Pral4800g00011 318 CDD CTWD_Cns1-like 127 310 - -
Pral4800g00011 318 Gene3D Tetratricopeptide repeat domain 1 139 IPR011990 GO:0005515
Pral4800g00011 318 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 3 315 - -
Pral4800g00011 318 SMART tpr_5 28 61 IPR019734 GO:0005515
Pral4800g00011 318 SMART tpr_5 62 95 IPR019734 GO:0005515
Pral4800g00011 318 Pfam Cns1/TTC4 Wheel domain 157 224 IPR044059 GO:0051879
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4800g00011 Pral-Chr4800 50743 54881 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00011 33 117 Calmodulin-binding Proteins AT3G25230 32.941 5.10e-06 46.2