Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4800g00010 ATGGCGCTATGGATGGAAAAGGGTTCTGAGCCCTTGACCGAAAGAGAGAAAGCAGACCTTGATGCTATTGCTGCTCTGAAAGAGTCCGCTGCTATCGAACTCAAGGAAAAGGGCAATCAATATGTCAAAATGGGTAAAAAACATTATTCTGATGCTATTGATTGTTACACAAGGGCAATAAATCAGCAAGTCTTGAGCGACTCAGAGAACTCAGTTCTTTTGGCAAATAGAGCACATGTAAATTTGCTGCTAGGAAATTATAGACGTGCTCTAACGGATGCGGAGGAGGCAATTAAGTCGTGCCCCTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCATCTCTTTCATTAAATTTGTTGGCTGAAGCTCAATCTCACTGTCGAAACGGCCTTCAGTTGGACCCAAATAATGAAGAATTGAAGAAGCTTGGCGAACAGGTTGATCTAAAGAAAGCAGAAGAGGACAAGCGTGAAGCTGAAGTCTCCAAAGCTGTTGCAGGGGCAAAGGAACTTGTGTCGGCAATAGAAAGTAGAAGCTTGAAGATTGGGAAGGCAATGTTTCAAGAGCTTACCGGACTTAAAAAACCGGTATTAGACAAAAATAATATTCTTCATTGGCCTGTTCTTCTCCTGTATGCAGAGGTTATGTCTAGTGACTTCATTGAAGATTTCTGTGAGACTGACATGTTTTCAGCTCATCTTGATATGATGTTTGCAGAAGATCAGCCTTTGCCATGGGATGATCAAAACAATTACAAACGTGAATTCATTGAATTATACTATGAGGCTGGTTCTGGAGTTTGTCTCTCAAAGGCAAAACTTCTTCATTGTTTATTAGAGGGAACTGCAGCATCTCAGCATGAAAGTTTCGGCGATGAAGAGAAAGATGCAGCTCATGGTACTAACCATGTCAACACAGGCGCTCCTAAATGGGTCAAAGTAAATGAAATGACGACGCTCCATGATGTTCTGAAGGACCCCAATTTTATTATCCCTGGCATCCCAGTATTCTATGTTGTTTCAAAGCGATCCAGCTTTTATGGCAAGTTCAAAGCTGGAAAATGGGCTCCCCCAAGCGTATGA 1086 0.418 MALWMEKGSEPLTEREKADLDAIAALKESAAIELKEKGNQYVKMGKKHYSDAIDCYTRAINQQVLSDSENSVLLANRAHVNLLLGNYRRALTDAEEAIKSCPSNIKAIYRAAKASLSLNLLAEAQSHCRNGLQLDPNNEELKKLGEQVDLKKAEEDKREAEVSKAVAGAKELVSAIESRSLKIGKAMFQELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFSAHLDMMFAEDQPLPWDDQNNYKREFIELYYEAGSGVCLSKAKLLHCLLEGTAASQHESFGDEEKDAAHGTNHVNTGAPKWVKVNEMTTLHDVLKDPNFIIPGIPVFYVVSKRSSFYGKFKAGKWAPPSV 361
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4800g00010 361 Gene3D Tetratricopeptide repeat domain 24 181 IPR011990 GO:0005515
Pral4800g00010 361 CDD CTWD_Cns1-like 170 353 - -
Pral4800g00010 361 SMART tpr_5 31 66 IPR019734 GO:0005515
Pral4800g00010 361 SMART tpr_5 105 138 IPR019734 GO:0005515
Pral4800g00010 361 SMART tpr_5 71 104 IPR019734 GO:0005515
Pral4800g00010 361 SUPERFAMILY TPR-like 22 143 IPR011990 GO:0005515
Pral4800g00010 361 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 358 - -
Pral4800g00010 361 Pfam Cns1/TTC4 Wheel domain 200 267 IPR044059 GO:0051879
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4800g00010 Pral-Chr4800 50563 54881 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4800g00010 14 160 Calmodulin-binding Proteins AT3G25230 31.646 3.09e-08 53.5