Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral479g00005 ATGTTTTTCACAGATCCTGTGCTTCCACACTATCACCAGACTCAGCTCCCCCAAATGATCCCTAATCATTCTACTTTTCAATCAGTTCAACAAGTTCTCACGAATGGCTTCTTCACCGGCAATGACACTACATTGAATCTTGACCGTGACATGGCTTTGCCGGAGCAGGGTGTTATCAGCTCCACTGGTGCAGTGTTTCCCGGCGAGGATGACAACGCTGTGAAACCAGGTGGCGGTGATGACAGAGTAAATGGTAATAACGACGCAGGATCTGTTGCGCGTGAGGGGAACGTGCCGCCAAGACGGAGGAATTACCGAGGCGTGAGGTGGCGGCCTTGGGGGAAGTTTGCGGCTGAGATCCGGAACCCAAAGAGAAACGGTGCGAGGACATGGTTGGGAACTTATAAGAAGAAAGAGGATGCGGCTCTGGCTTATGATAGAGCTGCTTTCAAGATGTGGGGCAGAAAAGCCAAGGTCAATTTTCCACACCTCATAGGATAG 501 0.507 MFFTDPVLPHYHQTQLPQMIPNHSTFQSVQQVLTNGFFTGNDTTLNLDRDMALPEQGVISSTGAVFPGEDDNAVKPGGGDDRVNGNNDAGSVAREGNVPPRRRNYRGVRWRPWGKFAAEIRNPKRNGARTWLGTYKKKEDAALAYDRAAFKMWGRKAKVNFPHLIG 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral479g00005 166 PANTHER DNA-BINDING DOMAIN 84 162 IPR044808 GO:0003700|GO:0009873
Pral479g00005 166 Gene3D AP2/ERF domain 103 163 IPR036955 GO:0003700|GO:0006355
Pral479g00005 166 ProSiteProfiles AP2/ERF domain profile. 104 162 IPR001471 GO:0003700|GO:0006355
Pral479g00005 166 Pfam AP2 domain 104 154 IPR001471 GO:0003700|GO:0006355
Pral479g00005 166 FunFam Ethylene-responsive transcription factor 2 103 163 - -
Pral479g00005 166 MobiDBLite consensus disorder prediction 68 100 - -
Pral479g00005 166 SMART rav1_2 104 164 IPR001471 GO:0003700|GO:0006355
Pral479g00005 166 SUPERFAMILY DNA-binding domain 104 163 IPR016177 GO:0003677
Pral479g00005 166 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Pral479g00005 166 PRINTS Ethylene responsive element binding protein signature 144 164 IPR001471 GO:0003700|GO:0006355
Pral479g00005 166 CDD AP2 104 164 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral479g00005 Pral-Chr479 34107 34607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral479g00005 96 166 AP2-EREBP Transcription Factor Family AT2G44840 71.233 1.77e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral479g00005 AP2 7.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral479g00005 K09286 - pcin:129296372 141.354