Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral479g00001 ATGGAAGGAGAGAAATCCGTTGCACTTGATGCTATTATGAAGGAAGCTGTGGATCTGGAGAATATTCCTGTTGAGGAAGTGTTTCAACATCTCAAATGCACAAAGGAAGGTTTGAGCTCTGAGGAAGCAAAGCAAAGGCTGGACATGTTTGGATATAATAAGCTGGAAGAAAAGAAAGAAAGTAAAATACTGAAATTTCTGGGGTTCATGTGGAATCCTTTGTCTTGGGTGATGGAAGCTGCTGCTATAATGGCTATTGCTATGGCCCATGGAGGGGGCAAGCGTGGAGATTATCAGGATTTTGGTGGTATAATCATGTTGCTTCTCATAAATTCTACCATAAGCTTCATAGAAGAAAACAATGCTGGAAATGCTGCAGCTGCACTTATGGCTCGTTTGGCCCCAAAAGCTAAGGTACTGCGTGATGGAAACTGGAGTGAAGAAGACGCTTCAGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTCGGTGACGTCATTCCTGCAGATGCTCGTCTCCTTGAAGGAGATCCTTTAAAGATTGACCAATCTGCTCTGACTGGAGAGTCACTTCCAGTGACAAAAAATCCTGGTGATGGAGTGTATTCTGGCTCAACTTGCAAGCAAGGAGAAATAGAAGCTTTAGTTATTGCCACTGGAGTCCACACTTTCTTTGGCAAAGCAGCTCACCTTGTGGAAAATACCACACATATAGGACACTTTCAGAAGGTTTTGACATCCATTGGGAACTTCTGCATTTGTTCTATTGCTGTTGGGATGCTTATCGAAATGATCGTGATATGGGGGGTTTATAGGAGACCTTACCGAATTGGAATCGATAACCTCCTTGTGCTTCTCATTGGTGGTATCCCAATTGCAATGCCAACTGTCCTTTCTGTCACAATGGCCATTGGTTCACACAAGTTGTCTCAGCAGGGTGCCATCACAAAGAGGATGACTGCCATTGAAGAAATGGCTGGCATGGATGTGTTATGCAGTGACAAAACTGGCACACTAACTCTTAACAAGCTTTCTGTGGACAAGAATTTGATTGAGGTTTTTCCCAGAGATGTTGACCAGGACATGGTTGTACTAATGGCTGCAAGAGCATCAAGGACAGAGAATCAAGATGCAATTGATGGTGCGATTGTTGCCATGTTATCAGATCCAAAAGAGGCAAGAGCCGGTATAACAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACGTATGTTGATGCTGATGGTAAGATGCACAGGGTTAGTAAAGGTGCACCAGAACAGATTCTCAATCTTTCATATAACAAAGCCGAGATTGCACAGAGAGTTCATACCATTATTGACAAGTTTGCAGAACGCGGACTACGGTCCCTTGCAGTAGCCCGGCAGGAAGTACCTGAAGGAACTAAGGAAAGTGCAGGAGGCCCTTGGGAATTTGTTGGCCTTCTTCCACTTTTTGATCCTCCTCGCCATGATAGTGGGGAAACAATCAAAAGAGCTCTGGATCTTGGTGTGACTGTCAAAATGATAACAGGAGATCAACTTGCAATTGCTAAGGAAACAGGAAGGCGTCTAGGAATGGGTACTAACATGTATCCTTCTTCATCTCTTCTTGGTGAACACAAGGGTGAAACACTTGAGTCTCTCCCAATTGATGAGCTCATTGAGAATGCTGATGGATTTGCTGGTGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGGAAGCACATTTGTGGGATGACGGGTGATGGTGTAAATGACGCTCCTGCCTTGAAGATAGCTGACATAGGTATAGCCGTAGCAGATGCCACTGATGCTGCTCGAAGCGCATCTGACATAGTTCTAACAGAACCTGGATTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCTATCTTCCAAAGGATGAAAAACTACACGATATATGCCGTGTCTATCACCATACGTATTGTGCTGGGCTTTATGTTATTGACCTGCTTTTGGAAATTTGACTTCCCTCCCTTCATGGTTCTTATAATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGAGTTAAGCCATCTCCAGCACCTGATAGTTGGAAGCTCAGTGAAATTTTTGCAACTGGGATTGTCCTTGGAAGTTATCTGGCTCTGATGACTGTGATATTCTTCTGGGCAGCTTATGAAACTGACTTTTTCCATAACCATTTTCATGTGGAAAACTTCAATTCAAACCGTCGCGACATGTCAGATAAAGAAGTCGCCAGGGTGCTGAATGAGAAAATGGGATCTGCAGTGTATCTTCAAGTCAGCATCATCAGTCAAGCGTTAATCTTTGTAACTCGCTCTCAGGGATGGTCTTACACCGAACGACCTGGTCTTTTGCTCGTTATTGCTTTCCTTATTGCTCAGCTGGTTGCAACAGTTTTATCTGCCACTGTGACCTGGAAAGTTGCTGGAATCAGAAAAATAGGCTGGAAGTGGACCGGAGTCATTTGGCTGTACAACATTGTAACATATGTACTGTTGGATCCTATAAAATTTGCTGCCCGTTATGCGTTAAGTGGAAGGGCTTGGAATTTGGTCGTAAATCAAAGAACTGCATTCACAAACAAAAACGACTTTGGAAGAGAAGCTCGTGAAGCTGCATGGGCAGCTGAGCAGAGAACCCTGCATGGTCTTCAATCTGCTGCCGAGTCAAAGACATTTGCAGAGAAACACACATTCAGGGAAATCAACACTCTAGCAGAAGAGGCCAAGAGAAGAGCTGAAATAGCAAGGATGAGAGAGCTTCACACTTTGAAAGGAAAAGTGGAATCATTTGCCAAGTTAAGGGGTTTGGACGTTGAAGCTATTAATGGGCACTACACTGTCTAA 2904 0.4353 MEGEKSVALDAIMKEAVDLENIPVEEVFQHLKCTKEGLSSEEAKQRLDMFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGGKRGDYQDFGGIIMLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGNWSEEDASVLVPGDIISIKLGDVIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEALVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSIGNFCICSIAVGMLIEMIVIWGVYRRPYRIGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFPRDVDQDMVVLMAARASRTENQDAIDGAIVAMLSDPKEARAGITEVHFLPFNPTDKRTALTYVDADGKMHRVSKGAPEQILNLSYNKAEIAQRVHTIIDKFAERGLRSLAVARQEVPEGTKESAGGPWEFVGLLPLFDPPRHDSGETIKRALDLGVTVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGEHKGETLESLPIDELIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPAPDSWKLSEIFATGIVLGSYLALMTVIFFWAAYETDFFHNHFHVENFNSNRRDMSDKEVARVLNEKMGSAVYLQVSIISQALIFVTRSQGWSYTERPGLLLVIAFLIAQLVATVLSATVTWKVAGIRKIGWKWTGVIWLYNIVTYVLLDPIKFAARYALSGRAWNLVVNQRTAFTNKNDFGREAREAAWAAEQRTLHGLQSAAESKTFAEKHTFREINTLAEEAKRRAEIARMRELHTLKGKVESFAKLRGLDVEAINGHYTV 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral479g00001 967 Gene3D - 97 830 - -
Pral479g00001 967 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Pral479g00001 967 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Pral479g00001 967 SFLD Haloacid Dehalogenase 314 642 - -
Pral479g00001 967 FunFam ATPase 4 plasma membrane-type 575 831 - -
Pral479g00001 967 FunFam Plasma membrane ATPase 344 491 - -
Pral479g00001 967 NCBIfam plasma-membrane proton-efflux P-type ATPase 37 821 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pral479g00001 967 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Pral479g00001 967 SUPERFAMILY HAD-like 328 638 IPR036412 -
Pral479g00001 967 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 863 IPR023298 -
Pral479g00001 967 Pfam E1-E2 ATPase 133 311 - -
Pral479g00001 967 Pfam Cation transporter/ATPase, N-terminus 21 84 IPR004014 -
Pral479g00001 967 SFLD p-type atpase 314 642 IPR044492 -
Pral479g00001 967 CDD P-type_ATPase_H 37 857 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pral479g00001 967 Gene3D - 135 219 - -
Pral479g00001 967 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Pral479g00001 967 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Pral479g00001 967 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Pral479g00001 967 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Pral479g00001 967 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Pral479g00001 967 PRINTS P-type cation-transporting ATPase superfamily signature 614 626 - -
Pral479g00001 967 Gene3D - 344 491 IPR023299 GO:0000166
Pral479g00001 967 Gene3D - 916 967 - -
Pral479g00001 967 FunFam Plasma membrane ATPase 135 219 - -
Pral479g00001 967 PANTHER CALCIUM-TRANSPORTING ATPASE 20 899 - -
Pral479g00001 967 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral479g00001 967 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral479g00001 967 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral479g00001 967 PRINTS H+-transporting ATPase (proton pump) signature 622 647 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral479g00001 967 PRINTS H+-transporting ATPase (proton pump) signature 776 797 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral479g00001 967 Pfam haloacid dehalogenase-like hydrolase 328 605 - -
Pral479g00001 967 NCBIfam HAD-IC family P-type ATPase 104 539 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral479g00001 967 NCBIfam HAD-IC family P-type ATPase 566 671 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral479g00001 967 Gene3D - 329 628 IPR023214 -
Pral479g00001 967 FunFam Plasma membrane ATPase 484 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral479g00001 Pral-Chr479 986 8711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral479g00001 8 967 Primary Pumps ATPases AT3G60330 78.772 0.0 1547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral479g00001 K01535 - rcu:8265793 1579.69