Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4799g00001 ATGGTCCCTAGCAATACGAACAATCTCTGCAATTGGAGTGCCATAGTCTGTGACAGCACTAATACAACAGTCTCAGAGATAAACCTCTCCGGAGCCAATCTTACTGGCTCACTTACGGGTTTGGACTTCACTTCTCTCCCCAGTCTCACTCGCCTGAACCTCAGTCACAATGGTTTCAATGGGTCAATTCCATCTGCTCTTGTTAACCTCTCCAAGCTCATTTTCCTGGACTTGGGACACAACTTCTTCAATGGAACTCTGCCTGCTGAGCTAGATCAGCTGAAAGAGCTTCAGTATATGAGTTTATACAACAACAACCTTAATGGGACCATTCCCTATCAGGTCACGAAGCTCCAAAAGGTATGGCACCTAGACTTTGGATCAAACTACTTTGTTAATCCTCCTGACTGGTCAATATATTCAGGCATGTCGTCCTTAACCCACCTTAGTTTAGCTCTCAATAGATTCACTTCTGAATTTCCAAGCTTCATTCTAGAGTGTCGAAATTTGACATTTCTAGACATGTCCTACAATCCGATGAGTCTAATACCAGAGTCATTGTATACCCATCTGCAAAAGCTTGAATACCTCGATATGAGCAAATGTGAGCTAGAAGGACACTTGTCAACAAACTTGTCCAAGCTTTCCAATCTCAAAGAAATTCATCTGCGTGCTAACAAGTTGACAGGTTCCATTTTCGCAGAAATAGGATTAATATCTGGACTACAAGTTCTTGAATTGAATGAGAATTTACTCGAGGGGGAAATTCCTTCCTCTCTAGGCCAGCTTAGTGACTTGCGCCGTCTTGATCTCAGACAAAATTCCTTAAATTCTACCATTCCTTCTGAGCTTGGCCTTTGTACCAACCTAACCTTCCTGGCTTTAGCAGTGAATTCTCTGGTTGGTTCCTTGCCAATGTCGTTGTCCAACCTGACAAAAATTAAAGAATTGGGCTTATCAGATAATCTCTTCACAGGTCAAATCCCTGATTCGTTGATCTCTAAATGGACAGAATTATCTTCTTTGCAGCTACAAAACAATAAATTTAGGGGAGAAATCCCTGCATCGATTGGCCTGTTGATGAAAATTGACATTCTTTTTCTATACAACAATACATTCTCTGGCCCCATTCCTCCCGAGATTGGGAACTTGCAAGCAATGAGCCATTTAGACGTCTCTTCAAACAAATTTTCTGGTCCAATTCCTTCAACCATATGGAGACTTGAAAACATTACAATCATAACTCTTGCCTCGAATAACCTCTCAGGAACCATTCCCATGGAAATTGGAAACCTCACTTCATTGATAAGTTTTGATGTCAACAGTAATTTTCTCCATGGTGTGTTGCCCAACACTATTTCCCAGTTAACCAAGTTACAAAATCTTTCTGTATTCACCAACAATTTTTCAGGCGACATTCCCAGAGATTTTGGGAAGTACAGCCTTGATTTGAGATATGTCTATCTTTCAAATAATAGCTTCTCCGGGGAACTACCGCCTGATCTGTGCAGCGGTTTTGCACTAATGGACTTAAGGGTGAATAACAATAGTTTTTCAGGACCATTGCCCAAGTGCTTGAGGAATAGTTCAGCATTAACAATGGTGAAGCTTGAGAGAAACCAATTCACAGGAAACATCACAGAAGCATTTGGGATTTACCTAAATCTTACATCCATCACACTCAGTGGCAACCAGTTTGTTGGTGAACTCTCCCCAAAATGGAGCGAATGCAAGAGCTTAATCAAGATAGACATGGATAACAACAAGCTCTCTGGGAAAATTCCATCTGAATTGAGTTTGTTAAGCCAATTACAATATCTAAGCCTACACTCCAATCAATTTACTAGTAGCATTCCACCAGAAATGGGAAATCTAAGGCAACTTTACTTGTTTAACTTGAGCGGCAATCATTTGACAGGAGAAATCCCCCAGACTCTTGGCAGATTGGACCGCCTTAATTGTCTTGACTTATCAAAGAACAAGTTTACTGGAAGCATACCGAAAGAGCTCAGTAACTGTGGCAGTTTAATTGGCTTGAATTTGAGCCATAACAATTTAACTAGGGAGATACCATTTGAACTTGGCAACCTGTTATCGCTCCAATACCTTCTGGACCTCAGCAGCAACTTTCTTTCAGGGCCAATTCCTCAGAACCTAGAAAAGCTCAGTCATTTGCAGATCCTTAATGTCTCACGCAACCATCTTTCAGGGACAATCCCACCATCGTTTTCAAGTATGCTCAGTCTTCAATCCATCGATTTTTCTTACAACAACCTGATGGGTCCTATACCCAGGGAAGGTATTTTCCAAAGAGCACCTACTGAAGCTTATGTTGGAAATTCTCGTTTGTGCGGCAAGGCAAAAGGATTAATTGCTTGTTCCACAGAATCTTCCCTAGGCAACTCTGGAGGGGTCAACAAAAAGGTACTTCTTGGTGTCATTATACCAGTTTGTGCGCTACTAATTTTCGGGGTGATTGTTGTTAGAATCCGAGTGTTCCACCAACGGGCCAAACTTCCAGACGAAGAGTCCAGCGATGCTCAGAAGACTAAAAAAACTGTAAGCATGATTTGGGGAAGAAAGGGAAAATTCACATTTGCTGAAATTGTTAAAGCAACCGATGACTTCGACGACAAATACTGCATTGGAAAAGGAGGTTTCGGAAGTCTTTATAGAGCAGAATTACCTACAGGTATAGTTGTCGCTGTCAAAAGACTCAATATCTCAAACTCTAGTGACATTCTAGCTGAGAATCTTCGTAGTGTCGAGAATGAGATAAAAGCTCTTACCGAAGCAAAACACCGCAATATCATAAAGCTTTATGGGTTTTGTCACACTGAAGAACACGCACACTTGGTTTACGAGTATGCGGAAAGAGGCAGCCTAGGAAAAGTGTTGTACGGCGAGGAAATGAAGACGGTATTAAGCTGGCCTCAGAGAGTGAAGATTGTGCAAGGGATAACGCAAGCTATAGCGTACCTACATAACGATTGCATCCCACAAGTTGTACATCGAGATGTGACGTTGAATAACATATTGCTGGACTCAGAATATGAACCCCGCCTCGCAGATTTTGGCATAGCGAAGCTTCTTACGCCAAATTCAACAACATGGTCCTCAATTGCTGGCTCCTATGGCTACATGGCTCCAGAGCTAGCACAAACAACGCAGGTGACAGAGAAGTGTGACGTTTATAGTTTTGGAGTGGTGGTATTAGAGATATTACTGGGAAAGCACCCCGGCGATTTCTTGGCCACATTGCCATCAATGGAGAATCCACAAGTGTTGGTGAAGGATGTAATAGACCAAAGATTCCCACCTCCTCCAGCTCGATTGGGCGAAGCGATAGCCTTTATAATGACCATAGCCTTGGCATGCACGCGAACGCACCCTGAGTCTAGACCCACCATGCATTTTGTGGCCCAACAATTCTCGGCTATTGAGCAGACTTCTCTTGTGGAACCCTTGAGCACAATATCCCTAAATAAGCTAACAAGGTTTCATATGTAG 3510 0.4234 MVPSNTNNLCNWSAIVCDSTNTTVSEINLSGANLTGSLTGLDFTSLPSLTRLNLSHNGFNGSIPSALVNLSKLIFLDLGHNFFNGTLPAELDQLKELQYMSLYNNNLNGTIPYQVTKLQKVWHLDFGSNYFVNPPDWSIYSGMSSLTHLSLALNRFTSEFPSFILECRNLTFLDMSYNPMSLIPESLYTHLQKLEYLDMSKCELEGHLSTNLSKLSNLKEIHLRANKLTGSIFAEIGLISGLQVLELNENLLEGEIPSSLGQLSDLRRLDLRQNSLNSTIPSELGLCTNLTFLALAVNSLVGSLPMSLSNLTKIKELGLSDNLFTGQIPDSLISKWTELSSLQLQNNKFRGEIPASIGLLMKIDILFLYNNTFSGPIPPEIGNLQAMSHLDVSSNKFSGPIPSTIWRLENITIITLASNNLSGTIPMEIGNLTSLISFDVNSNFLHGVLPNTISQLTKLQNLSVFTNNFSGDIPRDFGKYSLDLRYVYLSNNSFSGELPPDLCSGFALMDLRVNNNSFSGPLPKCLRNSSALTMVKLERNQFTGNITEAFGIYLNLTSITLSGNQFVGELSPKWSECKSLIKIDMDNNKLSGKIPSELSLLSQLQYLSLHSNQFTSSIPPEMGNLRQLYLFNLSGNHLTGEIPQTLGRLDRLNCLDLSKNKFTGSIPKELSNCGSLIGLNLSHNNLTREIPFELGNLLSLQYLLDLSSNFLSGPIPQNLEKLSHLQILNVSRNHLSGTIPPSFSSMLSLQSIDFSYNNLMGPIPREGIFQRAPTEAYVGNSRLCGKAKGLIACSTESSLGNSGGVNKKVLLGVIIPVCALLIFGVIVVRIRVFHQRAKLPDEESSDAQKTKKTVSMIWGRKGKFTFAEIVKATDDFDDKYCIGKGGFGSLYRAELPTGIVVAVKRLNISNSSDILAENLRSVENEIKALTEAKHRNIIKLYGFCHTEEHAHLVYEYAERGSLGKVLYGEEMKTVLSWPQRVKIVQGITQAIAYLHNDCIPQVVHRDVTLNNILLDSEYEPRLADFGIAKLLTPNSTTWSSIAGSYGYMAPELAQTTQVTEKCDVYSFGVVVLEILLGKHPGDFLATLPSMENPQVLVKDVIDQRFPPPPARLGEAIAFIMTIALACTRTHPESRPTMHFVAQQFSAIEQTSLVEPLSTISLNKLTRFHM 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4799g00001 1169 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 382 477 - -
Pral4799g00001 1169 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 484 1145 - -
Pral4799g00001 1169 ProSitePatterns Protein kinases ATP-binding region signature. 882 904 IPR017441 GO:0005524
Pral4799g00001 1169 Gene3D Ribonuclease Inhibitor 2 136 IPR032675 -
Pral4799g00001 1169 Gene3D Ribonuclease Inhibitor 137 232 IPR032675 -
Pral4799g00001 1169 Gene3D Ribonuclease Inhibitor 233 333 IPR032675 -
Pral4799g00001 1169 Pfam Protein kinase domain 879 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4799g00001 1169 FunFam Leucine-rich repeat receptor protein kinase MSP1 840 956 - -
Pral4799g00001 1169 Gene3D Ribonuclease Inhibitor 334 449 IPR032675 -
Pral4799g00001 1169 SUPERFAMILY L domain-like 368 474 - -
Pral4799g00001 1169 SUPERFAMILY RNI-like 26 350 - -
Pral4799g00001 1169 SUPERFAMILY Protein kinase-like (PK-like) 856 1142 IPR011009 -
Pral4799g00001 1169 Gene3D Transferase(Phosphotransferase) domain 1 958 1158 - -
Pral4799g00001 1169 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 481 797 - -
Pral4799g00001 1169 Gene3D Phosphorylase Kinase; domain 1 839 956 - -
Pral4799g00001 1169 Pfam Leucine Rich Repeat 724 745 IPR001611 GO:0005515
Pral4799g00001 1169 SUPERFAMILY RNI-like 449 761 - -
Pral4799g00001 1169 Pfam Leucine rich repeat 555 614 IPR001611 GO:0005515
Pral4799g00001 1169 ProSiteProfiles Protein kinase domain profile. 876 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4799g00001 1169 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1002 1014 IPR008266 GO:0004672|GO:0006468
Pral4799g00001 1169 Gene3D Ribonuclease Inhibitor 450 795 IPR032675 -
Pral4799g00001 1169 FunFam Nuclear pore complex protein NUP107 3 135 - -
Pral4799g00001 1169 Coils Coil 912 932 - -
Pral4799g00001 1169 SMART LRR_typ_2 311 335 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 649 673 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 263 287 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 384 408 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 46 70 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 432 455 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 746 771 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 94 118 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 168 190 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 143 167 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 722 745 IPR003591 -
Pral4799g00001 1169 SMART LRR_typ_2 601 625 IPR003591 -
Pral4799g00001 1169 FunFam Leucine-rich repeat receptor-like protein kinase 957 1158 - -
Pral4799g00001 1169 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 139 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4799g00001 Pral-Chr4799 1243 4828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4799g00001 2 595 Receptor kinase-like Gene Family AT4G08850 31.765 4.71e-78 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4799g00001 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4799g00001 - - gmx:100809137 1454.5