Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4798g00048 GTGGAAGCCTCCCAAGTGGAGGGTGATTGCAAGTCGGGACGTGATCAAGCCAATAACAGTACTGCAGTTGAGGAAAGGTCTCTGGAAGTGGGTATGAAGAATGATGGCCCTGAAAATCAAGCTTCTGAGAATCCTAGGCAACAAGCCGGTGAGGAGAGTGCTCCAGCCTCAAAGAGGCAGAGACAGGACGAGTAA 195 0.5128 MMMMHWLLTGTTFLLTPAFMILNQRCHARIQNHLHNCQGSSLKVTSNFQLRWAKNMLVLHPASSASSAPAKPRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPEPSEGSSEKRLTIEDMPPLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGADKKASPVSATEKPSGVSSDAIKDCAAKGDVEASQVEGDCKSGRDQANNSTAVEERSLEVGMKNDGPENQASENPRQQAGEESAPASKRQRQDE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4798g00048 297 Pfam Myb-like DNA-binding domain 73 124 IPR001005 -
Pral4798g00048 297 SUPERFAMILY Homeodomain-like 69 125 IPR009057 -
Pral4798g00048 297 Coils Coil 158 178 - -
Pral4798g00048 297 MobiDBLite consensus disorder prediction 244 258 - -
Pral4798g00048 297 NCBIfam myb-like DNA-binding domain, SHAQKYF class 71 125 IPR006447 GO:0003677
Pral4798g00048 297 Gene3D - 70 129 - -
Pral4798g00048 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 128 IPR017930 -
Pral4798g00048 297 MobiDBLite consensus disorder prediction 202 297 - -
Pral4798g00048 297 Pfam MYB-CC type transfactor, LHEQLE motif 155 202 IPR025756 -
Pral4798g00048 297 MobiDBLite consensus disorder prediction 270 288 - -
Pral4798g00048 297 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 38 285 IPR044848 GO:0003700
Pral4798g00048 297 FunFam Myb family transcription factor 70 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4798g00048 Pral-Chr4798 340157 340698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4798g00048 59 212 G2-like Transcription Factor Family AT4G28610 76.875 1.81e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4798g00048 Myb_DNA-binding 2.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4798g00048 - - gmx:100810560 346.28