Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4798g00046 ATGATTTGGGGAAGAAAGGGAAAATTCACATTTGCTGAAATTGTTAAAGCAACCGATGACTTCGACGACAAATACTGCATTGGAAAAGGAGGTTTCGGAAGTCTTTATAGAGCAGAATTACCTACAGGTATAGTTGTCGCTGTCAAAAGACTCAATATCTCAAACTCTAGTGACATTCTAGCTGAGAATCTTCGTAGTGTCGAGAATGAGATAAAAGCTCTTACCGAAGCAAAACACCGCAATATCATAAAGCTTTATGGGTTTTGTCACACTGAAGAACACGCACACTTGGTTTACGAGTATGCGGAAAGAGGCAGCCTAGGAAAAGTGTTGTACGGCGAGGAAATGAAGACGGTATTAAGCTGGCCTCAGAGAGTGAAGATTGTGCAAGGGATAACGCAAGCTATAGCGTACCTACATAACGATTGCATCCCACAAGTTGTACATCGAGATGTGACGTTGAATAACATATTGCTGGACTCAGAATATGAACCCCGCCTCGCAGATTTTGGCATAGCGAAGCTTCTTACGCCAAATTCAACAACATGGTCCTCAATTGCTGGCTCCTATGGCTACATGGCTCCAGAGCTAGCACAAACAACGCAGGTGACAGAGAAGTGTGACGTTTATAGTTTTGGAGTGGTGGTATTAGAGATATTACTGGGAAAGCACCCCGGCGATTTCTTGGCCACATTGCCATCAATGGAGAATCCACAAGTGTTGGTGAAGGATGTAATAGACCAAAGATTCCCACCTCCTCCAGCTCGATTGGGCGAAGCGATAGCCTTTATAATGACCATAGCCTTGGCATGCACGCGAACGCACCCTGAGTCTAGACCCACCATGCATTTTGTGGCCCAACAATTCTCGGCTATTGAGCAGACTTCTCTTGTGGAACCCTTGAGCACAATATCCCTAAATAAGCTAACAAGGTTTCATATGTAG 945 0.4444 MIWGRKGKFTFAEIVKATDDFDDKYCIGKGGFGSLYRAELPTGIVVAVKRLNISNSSDILAENLRSVENEIKALTEAKHRNIIKLYGFCHTEEHAHLVYEYAERGSLGKVLYGEEMKTVLSWPQRVKIVQGITQAIAYLHNDCIPQVVHRDVTLNNILLDSEYEPRLADFGIAKLLTPNSTTWSSIAGSYGYMAPELAQTTQVTEKCDVYSFGVVVLEILLGKHPGDFLATLPSMENPQVLVKDVIDQRFPPPPARLGEAIAFIMTIALACTRTHPESRPTMHFVAQQFSAIEQTSLVEPLSTISLNKLTRFHM 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4798g00046 314 Gene3D Phosphorylase Kinase; domain 1 2 101 - -
Pral4798g00046 314 ProSitePatterns Tyrosine protein kinases specific active-site signature. 147 159 IPR008266 GO:0004672|GO:0006468
Pral4798g00046 314 FunFam Leucine-rich repeat receptor-like protein kinase 102 303 - -
Pral4798g00046 314 FunFam Leucine-rich repeat receptor protein kinase MSP1 1 101 - -
Pral4798g00046 314 PANTHER LEUCINE RICH REPEAT KINASE 2 2 294 - -
Pral4798g00046 314 Coils Coil 57 77 - -
Pral4798g00046 314 Gene3D Transferase(Phosphotransferase) domain 1 103 303 - -
Pral4798g00046 314 PIRSF ILK 5 299 - -
Pral4798g00046 314 ProSitePatterns Protein kinases ATP-binding region signature. 27 49 IPR017441 GO:0005524
Pral4798g00046 314 ProSiteProfiles Protein kinase domain profile. 21 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4798g00046 314 Pfam Protein kinase domain 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4798g00046 314 SUPERFAMILY Protein kinase-like (PK-like) 8 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4798g00046 Pral-Chr4798 327228 328247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4798g00046 2 195 Receptor kinase-like Gene Family AT4G08850 48.718 5.57e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4798g00046 Pkinase 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4798g00046 - - qsa:O6P43_006861 434.491