Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4798g00029 ATGGATCATGTGATTGCTGGCAAGTTTAAACTAGGAAGGAAAATTGGGAGTGGATCTTTTGGAGAGCTGTATTTAGGTGTTAACGTCCAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGAGCAGGCATCCACAGCTTCATTATGAATCAAAATTATACATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTTATGGTTATTGACCTTCTTGGCCCAAGCTTAGAAGATCTGTTCAACTATTGCAACCGGAAGTTCAGCTTAAAGACAGTGTTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGATTTCTTCACCGTGACATAAAGCCTGATAATTTTTTAATGGGTCTAGGGCGCAAAGCAAACCAGGTTTACATCATTGATTATGGTCTTGGAAAGAAGTTCAGGGATCTTCAGACTCATAAGCACATACCATACAGAGAAAACAAGAACCTTACTGGCACAGCTCGCTACGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGAGATGATTTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCCTGGCAAGGTCTGAAGGCCGGCAACAAAAAACAAAAGTATGATAAGATCAGTGAGAAGAAATCATCAACCCCGATAGAGGTTCTCTGCAAATCATACCCATCTGAGTTTGTATCCTACTTCCACTACTGCCGATCATTACGGTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGGCTTTTCCGGGACTTGTTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCTCAGATTGGTGGCAGCTCTAGAGGGCGGCTTGGCAATGGCAAGGCACTTATGAATGCAGGGCCATCTGTACAAAAACCGGAAAAGATCCCAGCTGGGAAAGAGATTCGAGAGAAGTTTTCTGGTGGTGCGGAAGCATTTTCCCGAAGGAATCCCACAAGTCCTAGTCCTCATGTTGATGGCACCAAAAATAGGATTCTCGAGGAGGTACCATCACGCAGGGATGTGTATGATCAAGAGAAGGGACGCAGTTCCTCTCGATATGGAAGCACTTCAAGAAAAGCCACGATCTCATCGAACCGGCAGACTTCATCTGGTGACCATACTGACGGCCGTGCCGGCTGGCTGACATCCGGTGCCAACCGCCCATCTAGCACATATAGAACTCAAGCATTGCATGAGACGAAACAACCAAGTTTTACACGCAATTCATCTTCAAGAGCCAATCGTGACGAAGCTCTCAGGAGCTTTGAGCTCCTTTCTATTAGAAAGTAA 1380 0.4406 MDHVIAGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLGKKFRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDKISEKKSSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGGSSRGRLGNGKALMNAGPSVQKPEKIPAGKEIREKFSGGAEAFSRRNPTSPSPHVDGTKNRILEEVPSRRDVYDQEKGRSSSRYGSTSRKATISSNRQTSSGDHTDGRAGWLTSGANRPSSTYRTQALHETKQPSFTRNSSSRANRDEALRSFELLSIRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4798g00029 459 CDD STKc_CK1_delta_epsilon 8 282 - -
Pral4798g00029 459 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4798g00029 459 SMART serkin_6 9 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4798g00029 459 MobiDBLite consensus disorder prediction 378 406 - -
Pral4798g00029 459 FunFam Casein kinase 1-like protein 1 330 - -
Pral4798g00029 459 PANTHER CASEIN KINASE-RELATED 9 383 - -
Pral4798g00029 459 MobiDBLite consensus disorder prediction 337 445 - -
Pral4798g00029 459 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4798g00029 459 MobiDBLite consensus disorder prediction 357 377 - -
Pral4798g00029 459 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pral4798g00029 459 MobiDBLite consensus disorder prediction 413 442 - -
Pral4798g00029 459 FunFam Putative Casein kinase I 1 85 - -
Pral4798g00029 459 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Pral4798g00029 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral4798g00029 459 Gene3D Transferase(Phosphotransferase) domain 1 1 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4798g00029 Pral-Chr4798 267153 272847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4798g00029 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 5.68e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pral4798g00029 Pkinase 2.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4798g00029 K08960 - gmx:100781494 778.859