Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4798g00024 ATGGGTCTGAGAGACATAGGGGCATCACTTCCTCCGGGGTTTCGTTTCTATCCGAGCGATGAAGAGTTGGTGTGTCATTACCTCTACAAGAAGATCGTGAATGAGGAAATTCTCAGGGGTACTTTGATCGAAATAGACTTGCATACATGCGAGCCATGGCAGCTTCCAGAGGTGGCGAAGCTCAACGCAAACGAATGGTACTTCTTCAGCTTCCGAGACCGTAAATACGCCACAGGATTTCGGACGAATAGGGCGACGACATCTGGATATTGGAAAGCGACAGGGAAGGACAGGACCGTGCTGGACCCAATGACACGCGAGGTGGTAGGGATGAGGAAGACGTTGGTGTTTTACAGGAACAGAGCCCCCAATGGTATGAAAACCGGTTGGATCATGCATGAATTCCGCTTGGAGACCCCACACATGCCCCCCAAGGAGGACTGGGTTTTGTGTAGAGTATTTCACAAAAGCAGAGCAGACAACAGTAGCGCCAAACTCAGCCCACGGGACATGTTTGAGACCGCACCTTCGTTTACTTTTCCTTGTAATTCATCTCCAACGACCAATCAAACTGAGGCTCCTGGCTTCACCGCTTTCACGTCCATGCCACCCCCTGATTACCAATACCAGAACCAAAACGGCTCTCTAATGAATCTCCTTCAGTTTTCTCGGGAAACAAACATGGCCAGTACGGTCACTCAAAGTATTCCAAAAGGCGATCCTATTGGATATGACGATCATGGGTTCTTGTGGGACGTGGACATGGAAGAAAACAGCAACCACCACAATGGCGTGGCCTCAGTACACCTGGACGGAATGAGATTCGACGTTGATGATGATAGTATGGTTGTGTTATAA 858 0.4918 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKIVNEEILRGTLIEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPMTREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSRADNSSAKLSPRDMFETAPSFTFPCNSSPTTNQTEAPGFTAFTSMPPPDYQYQNQNGSLMNLLQFSRETNMASTVTQSIPKGDPIGYDDHGFLWDVDMEENSNHHNGVASVHLDGMRFDVDDDSMVVL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4798g00024 285 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Pral4798g00024 285 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Pral4798g00024 285 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Pral4798g00024 285 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 210 - -
Pral4798g00024 285 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4798g00024 Pral-Chr4798 217167 220801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4798g00024 6 157 NAC Transcription Factor Family AT1G56010 59.375 5.03e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4798g00024 NAM 5.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4798g00024 - - pcin:129298149 508.064