Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4798g00011 | ATGGCTGCCTCGGACTCTGCTTTTCCCGTATTCGCCATCGTTGTGCTCAGCATCATGGCCACGGCTCTGTTGCTCATCGGCTACTTCACTTTCGTCGCCAAGTGCTGCTCTTACTGGCACCACCTCAACCCCCTCACATGGCTTTCCATTCTGCGTCCCAGACACAGCGAAGAACCCTTCATAGCTCTCTCCCCCACCACGTGGAATCGTGGCCTTGATGAATCCATCATTCGAGAAATACCCACGTTCCAGTTCGTCAAAGGTGAGGATCATGGTGGTAGTACTGTGTACGGGTGTGTGGTCTGTTTGAGTGAGTTTCAGCAACAGGACATGCTCAAAGTTCTGCCCAAATGCAGCCATGCTTTTCACTTGGACTGTATCGATATTTGGCTTCAGAGCAACGCAAATTGTCCTCTTTGCAGATCATGCATTTCTGGCACCACGCGTCCTCCATTGGACCATATCATAGCACCGAGCTCTTCTCCTCAAGATTCTCAAATACTCTCCAATATGGGCAGTGATGAAGACTTTGTGGTAATTGAATTGTGGGGAGAAGATGGGGGATCGCTGTCATTGAGGCAACATGAACGAAACCAGTCGAGCGGGGGAAGCCTGGCACAGAGTAGAAGTCACTCCACGAGGAAGATGCAGCAGAAGCTCGGGCACCTGAAATCGAGGAAGTGGCAGCATGTGTCCATCATGGGAGACGAGTGCATTGATACGAGGGAGAAAGATGAACAGTTCTGTATTCAGCCACTTAGGAGATCTTTCTCCATGGATTCTGCAAATGATAGGCAAATTTACTTGGAAGTTCAAGCCATTACACAGCAGCCGAATAGGCATCAAAATGACGCTAGTGGGAGTGAAGACAGTAACGTTCACAGCAGAGGTCGAAGGTCTTTCTTTCCATTTCGTTATGGTCGTGGATCCAAAAACGCAGTACTTCCTCTGGAGAATGAGGTCTGA | 966 | 0.4938 | MAASDSAFPVFAIVVLSIMATALLLIGYFTFVAKCCSYWHHLNPLTWLSILRPRHSEEPFIALSPTTWNRGLDESIIREIPTFQFVKGEDHGGSTVYGCVVCLSEFQQQDMLKVLPKCSHAFHLDCIDIWLQSNANCPLCRSCISGTTRPPLDHIIAPSSSPQDSQILSNMGSDEDFVVIELWGEDGGSLSLRQHERNQSSGGSLAQSRSHSTRKMQQKLGHLKSRKWQHVSIMGDECIDTREKDEQFCIQPLRRSFSMDSANDRQIYLEVQAITQQPNRHQNDASGSEDSNVHSRGRRSFFPFRYGRGSKNAVLPLENEV | 321 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4798g00011 | 321 | MobiDBLite | consensus disorder prediction | 194 | 214 | - | - | |
Pral4798g00011 | 321 | MobiDBLite | consensus disorder prediction | 194 | 224 | - | - | |
Pral4798g00011 | 321 | MobiDBLite | consensus disorder prediction | 276 | 296 | - | - | |
Pral4798g00011 | 321 | FunFam | E3 ubiquitin-protein ligase ATL6 | 62 | 146 | - | - | |
Pral4798g00011 | 321 | MobiDBLite | consensus disorder prediction | 276 | 290 | - | - | |
Pral4798g00011 | 321 | PANTHER | RING-H2 FINGER PROTEIN ATL16 | 4 | 318 | IPR044600 | GO:0016567|GO:0016740 | |
Pral4798g00011 | 321 | Pfam | Ring finger domain | 99 | 141 | IPR001841 | - | |
Pral4798g00011 | 321 | SUPERFAMILY | RING/U-box | 98 | 145 | - | - | |
Pral4798g00011 | 321 | ProSiteProfiles | Zinc finger RING-type profile. | 99 | 141 | IPR001841 | - | |
Pral4798g00011 | 321 | CDD | RING-H2_EL5-like | 99 | 141 | - | - | |
Pral4798g00011 | 321 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 146 | IPR013083 | - | |
Pral4798g00011 | 321 | SMART | ring_2 | 99 | 140 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4798g00011 | Pral-Chr4798 | 130460 | 132203 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4798g00011 | 2 | 281 | C3H Transcription Factor Family | AT1G04360 | 43.974 | 1.18e-75 | 235 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4798g00011 | K19041 | - | gmx:100809883 | 439.113 |