Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4798g00006 | ATGGCTTCTCCTGCCTCTGGTTCTGGTTCTCCCTGCGGGGCTTGCAAGTTCCTCCGAAGGAAGTGCGCCGCCGATTGCATATTTGCGCCCTACTTCTGCTCCGATCAAGGCCCTGCTAGATTTGCTGCCATTCATAAGGTGTTTGGGGCTAGCAATGTTTCTAAATTGCTCCTGCATCTACCAGCTCGTGATCGCTGTGAGGCCGTCGTCACTATTGCTTATGAAGCCCAGGCTCGGATTAGAGACCCTGTCTATGGCTGTGTCGCTCACATATTTGCCTTGCAGCAACAGGTGGCGTGCTTGCAGGCACAGCTGATGCAAGTGAAGGCTCAACTAGCGCAGAAGAACCTAATGGAAAGCAGGAAACTAGAGAACCTGTCGGCAGGGAATCATAACATTGTGAGCGATCAAGCAATGAATGCATACAACACGAACCCTATATCTCCTCAGAGCTCTCTCGAGTCAATTGACCACAACATCGGTGATGGAATTAACATGCAAGACATACGAAGTAGAGAGGAATTTCCATTCCCTAAAAGGAGATCTTATAACAATGATTTGGGTGAGCTCCATCAGCTTGCACTCAGGATGATGAGGAACTAG | 603 | 0.4925 | MASPASGSGSPCGACKFLRRKCAADCIFAPYFCSDQGPARFAAIHKVFGASNVSKLLLHLPARDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQVKAQLAQKNLMESRKLENLSAGNHNIVSDQAMNAYNTNPISPQSSLESIDHNIGDGINMQDIRSREEFPFPKRRSYNNDLGELHQLALRMMRN | 200 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4798g00006 | 200 | ProSiteProfiles | LOB domain profile. | 10 | 112 | IPR004883 | - | |
Pral4798g00006 | 200 | Coils | Coil | 91 | 111 | - | - | |
Pral4798g00006 | 200 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 7 | 145 | - | - | |
Pral4798g00006 | 200 | Pfam | Lateral organ boundaries (LOB) domain | 11 | 109 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4798g00006 | Pral-Chr4798 | 82586 | 83883 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4798g00006 | 5 | 200 | AS2 family | AT2G42430 | 54.008 | 8.78e-77 | 229 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Pral4798g00006 | LOB | 1.3e-36 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4798g00006 | K13944 | - | gmx:100801508 | 291.582 |