Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4798g00006 ATGGCTTCTCCTGCCTCTGGTTCTGGTTCTCCCTGCGGGGCTTGCAAGTTCCTCCGAAGGAAGTGCGCCGCCGATTGCATATTTGCGCCCTACTTCTGCTCCGATCAAGGCCCTGCTAGATTTGCTGCCATTCATAAGGTGTTTGGGGCTAGCAATGTTTCTAAATTGCTCCTGCATCTACCAGCTCGTGATCGCTGTGAGGCCGTCGTCACTATTGCTTATGAAGCCCAGGCTCGGATTAGAGACCCTGTCTATGGCTGTGTCGCTCACATATTTGCCTTGCAGCAACAGGTGGCGTGCTTGCAGGCACAGCTGATGCAAGTGAAGGCTCAACTAGCGCAGAAGAACCTAATGGAAAGCAGGAAACTAGAGAACCTGTCGGCAGGGAATCATAACATTGTGAGCGATCAAGCAATGAATGCATACAACACGAACCCTATATCTCCTCAGAGCTCTCTCGAGTCAATTGACCACAACATCGGTGATGGAATTAACATGCAAGACATACGAAGTAGAGAGGAATTTCCATTCCCTAAAAGGAGATCTTATAACAATGATTTGGGTGAGCTCCATCAGCTTGCACTCAGGATGATGAGGAACTAG 603 0.4925 MASPASGSGSPCGACKFLRRKCAADCIFAPYFCSDQGPARFAAIHKVFGASNVSKLLLHLPARDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQVKAQLAQKNLMESRKLENLSAGNHNIVSDQAMNAYNTNPISPQSSLESIDHNIGDGINMQDIRSREEFPFPKRRSYNNDLGELHQLALRMMRN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4798g00006 200 ProSiteProfiles LOB domain profile. 10 112 IPR004883 -
Pral4798g00006 200 Coils Coil 91 111 - -
Pral4798g00006 200 PANTHER LOB DOMAIN CONTAINING PROTEIN 7 145 - -
Pral4798g00006 200 Pfam Lateral organ boundaries (LOB) domain 11 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4798g00006 Pral-Chr4798 82586 83883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4798g00006 5 200 AS2 family AT2G42430 54.008 8.78e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4798g00006 LOB 1.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4798g00006 K13944 - gmx:100801508 291.582