Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4798g00004 ATGAAACATATCTATGCAGCCCAGCTTCATCTTGAGAAAATGGGTATTTCGGAGAACATTGTTGTTGGTTCTCACATTTGGGTTGGTGATCCAGAACAAGTATGGATTGATGGGGAAGTACTGAAAATCAATGGAGAGCAAGTTGAGGTTCAAACTAGTTCTGGCAACACGGTTGTTGCCTGTTTGTCAAAATTATATCCTAAGGATGCAGATGCTCCTGCTGATGGAGTTGATGATATGACCAAGCTTGCTTATTTGCATGAGCCGGCAGTGCTTCATAATTTAGCAACTAGATACAAGATGAATGAGATATATACTTACACTGGAAATATTCTTATTGCTGTCAATCCGTTTCAAAGTCTTCCGCACTTGTATGACACTGATGTGATGCAACAGTACAAGGGAGCAATGCTTGGAGATTTAAGCCCCCATGTATTTGCTATTGCTGAAGCTGCATACAGGGCAATGGTCAATGAGGAGAAAAGCAACGCTATTCTTGTTAGTGGTGAGAGCGGAGCCGGTAAGACAGAAACAACCAAAATGCTCATGCGTTATCTGGCATATTTGGGTGGACATGCTGCAGCTGAAGGAAGCAGTGTTGAGCAGCAAGTTTTAGAATCAAACCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTTAGAAATAACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATTCAATTCAATAAGCATGGAAAAATATCTGGCACAGCTATTAGAACATACCTCCTAGAGAAATCTCGTGTTTGCCAAATCTCTGATCCTGAGCGTAATTATCACTGTTTTTACCTTCTCTGTGCAGCTCCGCCTGAGGAAAAGGAGAGATATAAGTTGGGAGATCCTAAATCATTTCACTACCTTAATCAATCCAGTTGCTATGAATTAGATGGTGTTAATGCTGCCCAAGAGTACTTGAGCACGAAGAGAGCCATGGATATAGTGGGAATCAATTGTGAAGAACAGGATGCAATTTTCAGAGTTGTGGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGAAAAATCAGACGAAGACTCATCAGTTTTAGCAGATGAAGAATCAAAGTCCCATCTCGAAACGACAGCAGAGCTTCTCAAGTGTGTTCCAAGTGCTTTGGAAGATGCACTTTGTAAGCGTATGATGATTACCCCAGAGGAAGTCATCAAGAGAAGTCTTGATCCTCTTGCTGCAACAGTTAGCAGGGATGGTTTAGCCAAGACATTATATTCTCGTTTATTTGACTGGTTAGTCAAAAAAATCAATGTCTCCATTGGGCAGGATCCCAACTCAAAATGTATCATTGGAGTTCTTGACATATATGGCTTTGAAAGCTTTCGAGCCAATAGTTTTGAGCAGTTTTGTATTAATTACACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATATACAAGGGAAGGGATTGATTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTATTGGATCTTATTGAAAAGAAACCAGGTGGAATCATTGCTCTGCTTGATGAGGCATGTATGTTTCCAAAGTCAACTCATGAAACATTTTCGCAAAAGCTTTATCAGAGTTTCAAAAATAACAAGCGCTTCATCAAGCCAAAATTATCTCAATCAGATTTTACCATTGTTCATTATGCAGGGGAGGTTCAGTATCAGTCTGAACAGTTTCTAGACAAAAACAAAGACTATGTTGTTCCTGAGCATCAAGACATGCTGAGTTCTTCCAAATGTTTTTTTGTAGCAGGCCTTTTCCCCCCACTTTCTGAGGAGACGGCCAAATCTGCTAAATTTGCTTCCATCGGTGCCCGCTTTAAGCTACAATTACAACAACTGATGGATACGCTAAAATCCACAGAGCCCCACTATATTAGATGTGTCAAGCCAAATAATGAATTAAAACCTGCTGTGTTTGATAATATGAATGTCATCCAACAACTTCGTTCCGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTTCCAACACACAGGACCTTCCATGATTTTTTGAGTCGAGTGGCTCCTCTTGCTCCAGAGATTGTCAAAGAAAACTCTGATGAGAAAGATTCATGTATAAAGATTTTGCAGAAGATTGGCCTTACAGGTTATCAGATAGGGGAATCACAGATATTCTTGAGGGTTGGTCAGATGGCTGAGTTAGATGCTCAAAGGGCACTCCTCCTTAGCAACTCCGCTACTGTTATCCAGAAGCGGATCAAAACCCATCTGGCTCAGAAAAGATACGTCACTTTACAAAAGTCTTCTGTCTCTGTGCAATCGTTTTGTAGAGGAGAAATGGCTCGGAGATCATATTATCACATGAAGAGAAATGCAGCTGCTGTCAGAATTCAAAGGAATATTCGTGGAAAACTGGCGAGGAAAAAGTACAACCAAATATATACTTCTGCCATTGTATTGCAGACAGGGTTCAGGGCAATGGCAGCTCATGGTGAATTGAGATATAGACTGGAAACTAGTGCATCAATTAAGCTTCAGGTTGCAGAGAAAGCAGTTGAAATGGAAAGCCAGGCTCTGGAGAAGGCAGTGGAAAATGAAAGTCCTCACGTGAAAGAATCCATGAATCAGTGTAAAGATACTGAAAGCACTCATCCTATCAAAGAACCATCAAGTCCTTTCCAAGAATCTGAAAATATTGAGGCTCTTACTTCAGAAGTTATAAATTTGAAGGTTATGTTACATGCAGAAAAACAAAGAGCTGATGATTGTGAAAGGAAATATGTGGAAGCCCAAGAATCTAGAGAGGAGTTACGCAAAAAGTTAGAAGAAACAGAAAAGAGAGTATATCAGCTTCAAGACTCATTGAACAGGATGATATCTTCCATGTCAAGCCAAGTTGCGGAACTGAAATTGATATTAAGTACTTCATCAAGATTAAGTTCAACTTTTCGGCCTATTGCTAGAGTTGATGTTGCTTCCAGCAACTCTGATACTTCTTCGACAGATTCTGATTTCGCAGTTTCGGCTCCTGCTCCAAATACAACCAATCAGTCTAACTCTCAGCCTAGTTCTAGTCAGCTAGTTGTTCAGGGTGTCACTGTAGCGGATGGTTCAGGATCTGAAGGTGAAAAGGAGGGGTCATTTGATGATTTCTTCTAG 3174 0.4023 MKHIYAAQLHLEKMGISENIVVGSHIWVGDPEQVWIDGEVLKINGEQVEVQTSSGNTVVACLSKLYPKDADAPADGVDDMTKLAYLHEPAVLHNLATRYKMNEIYTYTGNILIAVNPFQSLPHLYDTDVMQQYKGAMLGDLSPHVFAIAEAAYRAMVNEEKSNAILVSGESGAGKTETTKMLMRYLAYLGGHAAAEGSSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFNKHGKISGTAIRTYLLEKSRVCQISDPERNYHCFYLLCAAPPEEKERYKLGDPKSFHYLNQSSCYELDGVNAAQEYLSTKRAMDIVGINCEEQDAIFRVVAAILHLGNIKFEKSDEDSSVLADEESKSHLETTAELLKCVPSALEDALCKRMMITPEEVIKRSLDPLAATVSRDGLAKTLYSRLFDWLVKKINVSIGQDPNSKCIIGVLDIYGFESFRANSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTREGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQSFKNNKRFIKPKLSQSDFTIVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSSSKCFFVAGLFPPLSEETAKSAKFASIGARFKLQLQQLMDTLKSTEPHYIRCVKPNNELKPAVFDNMNVIQQLRSGGVLEAVRIKCAGFPTHRTFHDFLSRVAPLAPEIVKENSDEKDSCIKILQKIGLTGYQIGESQIFLRVGQMAELDAQRALLLSNSATVIQKRIKTHLAQKRYVTLQKSSVSVQSFCRGEMARRSYYHMKRNAAAVRIQRNIRGKLARKKYNQIYTSAIVLQTGFRAMAAHGELRYRLETSASIKLQVAEKAVEMESQALEKAVENESPHVKESMNQCKDTESTHPIKEPSSPFQESENIEALTSEVINLKVMLHAEKQRADDCERKYVEAQESREELRKKLEETEKRVYQLQDSLNRMISSMSSQVAELKLILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFAVSAPAPNTTNQSNSQPSSSQLVVQGVTVADGSGSEGEKEGSFDDFF 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4798g00004 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 796 IPR027417 -
Pral4798g00004 1057 PANTHER MYOSIN 67 987 - -
Pral4798g00004 1057 Pfam Myosin N-terminal SH3-like domain 23 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 CDD MYSc_Myo11 89 732 IPR036018 -
Pral4798g00004 1057 FunFam Class V myosin 451 593 - -
Pral4798g00004 1057 Pfam IQ calmodulin-binding motif 749 767 IPR000048 GO:0005515
Pral4798g00004 1057 Pfam IQ calmodulin-binding motif 797 815 IPR000048 GO:0005515
Pral4798g00004 1057 Pfam IQ calmodulin-binding motif 772 790 IPR000048 GO:0005515
Pral4798g00004 1057 Gene3D Myosin VI head, motor domain, U50 subdomain 324 613 - -
Pral4798g00004 1057 Coils Coil 918 959 - -
Pral4798g00004 1057 Gene3D Kinesin motor domain 78 674 IPR036961 -
Pral4798g00004 1057 Gene3D - 747 796 - -
Pral4798g00004 1057 Gene3D - 797 848 - -
Pral4798g00004 1057 ProSiteProfiles IQ motif profile. 795 821 IPR000048 GO:0005515
Pral4798g00004 1057 Gene3D - 451 635 - -
Pral4798g00004 1057 PRINTS Myosin heavy chain signature 105 124 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 PRINTS Myosin heavy chain signature 162 187 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 PRINTS Myosin heavy chain signature 494 522 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 PRINTS Myosin heavy chain signature 209 236 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 PRINTS Myosin heavy chain signature 441 469 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 Gene3D - 678 745 - -
Pral4798g00004 1057 ProSiteProfiles Myosin motor domain profile. 75 744 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 SMART iq_5 769 791 IPR000048 GO:0005515
Pral4798g00004 1057 SMART iq_5 794 816 IPR000048 GO:0005515
Pral4798g00004 1057 SMART iq_5 746 768 IPR000048 GO:0005515
Pral4798g00004 1057 MobiDBLite consensus disorder prediction 997 1057 - -
Pral4798g00004 1057 MobiDBLite consensus disorder prediction 867 902 - -
Pral4798g00004 1057 Gene3D - 265 323 - -
Pral4798g00004 1057 MobiDBLite consensus disorder prediction 997 1038 - -
Pral4798g00004 1057 ProSiteProfiles IQ motif profile. 747 776 IPR000048 GO:0005515
Pral4798g00004 1057 Pfam Myosin head (motor domain) 77 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 SMART MYSc_2a 69 745 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 MobiDBLite consensus disorder prediction 867 890 - -
Pral4798g00004 1057 FunFam Myosin heavy chain 265 320 - -
Pral4798g00004 1057 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 21 70 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pral4798g00004 1057 Coils Coil 850 870 - -
Pral4798g00004 1057 ProSiteProfiles IQ motif profile. 770 799 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4798g00004 Pral-Chr4798 51827 65577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4798g00004 14 949 Myosins gene family AT1G08730 66.032 0.0 1318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4798g00004 K10357 - gmx:100803485 1602.8