Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4793g00025 ATGGCGAGGTTCAACTGCTATAATTATTCCCACATGACTTCGCTTGTTTTGGCTCTTCTCATACAGATTTGTTCTCAACCTGTGGCTTCTGGTTCATCATCATCTTCCGTAGTAGAGTTTCTTCCGGGCTTCCGGGGACGCCTTCCTTTTCATCTTGAAACTGGGTACGTTGGGGTTGGGGAAGAAGAAGAAGTGCAAGTTTTCTATTATTTTATTAAGTCAGAGAACAATCCTGAAGATGATCCTATCCTGATTTGGTTACAAGGAGGTCCTGGTTGCAGTTCGTTCGGGGGACTTGTCAATGAAATAGGTCCAATTGCATTTCCAAACCAGGTGTACAATGGGAGCTTGCCTGGCTTACTCTTGAGGCCTCCCTCATGGACAAAGGTAAGCAATATAATTTTTCCAGATTTGCCCGTTGGAACAGGCTTCACATACGCCAAAACTGAAGCTGCGAAGCAATCAAGTGATTCGGGTGGAGTGCGTCATGCTGATCAATTTTTAAGGAAGTGGCTAATGGATCATCCAGAATACTTATCACATAAAATGTATTTGTGTGGTGAATCCTATAGTGGCATTACTATTCCAGCCTTATTTCAAGAAATTTCACATGGAAACGAAAACGGGATCCAACCATGGATAAATATCCAGGGATACATACTTGGGAATCCATTGACCACACGCCATGAAGAAAACTATCAAATCCCATTTGCTCATGGAATGGGATTGATTTCTGACGAACTCTACGAGTTAACTGCAGAAATTGATCCCGCTATGATTTTGGAACCTGCCTTTTGTGGTTATGATCTGCGTGTGCTTCCCCCAAGAATTTCTTTGATGAAGAGATCTCTATCCCAGAAAGTGAAAGACCCTAACTTTCCATCAAAATGTCGGCGACTAGGATATTTACAAGCGAGACACTGGGCCAATAATGATCATGTTCGTAAAGCACTCCATGTTCGAAAGGGAACAACAGGAGAATGGATGCGTTGTAATCGTAGTTTACCTTACAAGCAGGACATCCATAGTAGCTTTTATATTCATGCAAATCTCAGTACAAAGGGTTACCGTTCTTTAATATACAGTGGCGATCATGACATGGGTTTCCCTTTCCTATCAACACAAGCATGGATAAGATCTTTGAATTACTCCATCATTGATGACTGGAGGCCTTGGCATGTCAATCACCAAGTTGCTGGATACACAAGGACTTACTCCAATCGCATGACATATGCAACTGTGAAGGGTGCTGGACATTCAGCTCCAGAATTCAAACCTGAAGAATGTCTCGCGATGTTAAAGAGATGGATAGCTAATGAGCCTCTCTAA 1329 0.4244 MARFNCYNYSHMTSLVLALLIQICSQPVASGSSSSSVVEFLPGFRGRLPFHLETGYVGVGEEEEVQVFYYFIKSENNPEDDPILIWLQGGPGCSSFGGLVNEIGPIAFPNQVYNGSLPGLLLRPPSWTKVSNIIFPDLPVGTGFTYAKTEAAKQSSDSGGVRHADQFLRKWLMDHPEYLSHKMYLCGESYSGITIPALFQEISHGNENGIQPWINIQGYILGNPLTTRHEENYQIPFAHGMGLISDELYELTAEIDPAMILEPAFCGYDLRVLPPRISLMKRSLSQKVKDPNFPSKCRRLGYLQARHWANNDHVRKALHVRKGTTGEWMRCNRSLPYKQDIHSSFYIHANLSTKGYRSLIYSGDHDMGFPFLSTQAWIRSLNYSIIDDWRPWHVNHQVAGYTRTYSNRMTYATVKGAGHSAPEFKPEECLAMLKRWIANEPL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4793g00025 442 FunFam Carboxypeptidase 296 441 - -
Pral4793g00025 442 FunFam Serine carboxypeptidase-like 19 31 258 - -
Pral4793g00025 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Pral4793g00025 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 409 422 IPR001563 GO:0004185|GO:0006508
Pral4793g00025 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Pral4793g00025 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Pral4793g00025 442 Gene3D alpha/beta hydrolase 31 262 IPR029058 -
Pral4793g00025 442 SUPERFAMILY alpha/beta-Hydrolases 38 441 IPR029058 -
Pral4793g00025 442 Gene3D - 300 442 - -
Pral4793g00025 442 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 426 IPR001563 GO:0004185|GO:0006508
Pral4793g00025 442 Pfam Serine carboxypeptidase 42 439 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4793g00025 Pral-Chr4793 290016 296250 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4793g00025 32 61 Calmodulin-binding Proteins AT2G22960 60.000 4.70e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4793g00025 K16296 - gmx:100792006 509.99