Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4793g00018 ATGAGCTCAAACCACAGTGCGTCTATCACAAAAATGCTTCTCTTTGTTGTCCTCTTACAGATTTGGTGTCGCCCTGCCATGGCTTCGGCTTCAACAGTAGAGTTTCTTCCTGGCTTCCATGGATCCCTTCCTTTCCATCTTGAAACTGGGTATGTGGGAGTTGGGGAAGGAGAAGAAGTGCAAGTTTTCTATTATTTTATTAAGTCAGAGAATAATCCTCAAGAAGATCCTCTCCTTCTTTGGCAATCTGGGGGTCCTGGTTGCTCTGGCTTCGTCGGACTTGTCCATGAAATAGGTCCACTTGCATTTATAAACCAACAATACAATGGGAGCTTGCCTAGCTTAGTCTTGAGGTCTCAGTCATGGACTAAGGTAAGTAGTATTATCTTTGTAGATTTACCTATTGGATCAGGCTTCACTTACACCAAAGCAAAAGGAGTTGTTGAGCAGAGTGATTGGACCCTAATTCATCATGCCCACCAATTCTTGAGGAAGTGGCTGATCAATCATCCGGAATACATGTCACATAAAGTTTATCCAGCGGGTGACTCCTATGCTGGCATTCTTATCCCAGCCTTGTTTCAAGAAATTTCACATGCCAATGAAAATGGGGTTCAGCCACGGATAAATATCCAGGGATACATACTGGGGAATCCAGTGACAACAAAGCTTGAAATAAATTATGCAATCCCCTTTGCTCACGGAATGGGACTCATCTCTGATGAACTTTACGAGTCATTACAGCAGAACTGTAGAGGAAATTACCAAAACATAGATCCCAGAAACTTGTTATGTCTCAGAGATTTCCAGTCATTCCAAGAGTTAACTGCAGAAGTGGATCATGCTCAGATTTTGGAACCAGCCTTTTGTGGTTATGATTTAAACTCGATGCCCCAGGGAAGTACTATTCTGAAGAGATCCCTAACCCAGAAAGTGAAGGCCAGTGACTATACCGCATCAAGATGTCGGAGATACGAATATTTTGAAGCTGTATATTGGGCCAATAATGATGACGTTCGCCAAGCACTCCATGTTCGAAAGGGGACTGTAGGACATTGGGAGCGTTGTCGTAATATTACAACTTACAAGTTTGATATCAATAGCAGCTTTCATTTTCACGTAAATCTCAGTGCAAAAGGCTATCGTTCTTTGATATACAGTGGGGATCATGACATGATAGTTTCTTTCTTATCAACACAAGCATGGATCAGATCTTTGAATTACTCCATTGTTCATGACTGGAGACCTTGGCATTTCAATAGCCAGGTTGCTGGATACACGAGGACGTACTCCAATCGAATGACATTTGCAACTGTCAAGGGTGCAGGACATACAGTTCCAGAGTTCAAACCTGAAGAATGTCTTGCCATGTTCAAGAGATGGATAGCTAACGAGAATCTCTAG 1404 0.4245 MSSNHSASITKMLLFVVLLQIWCRPAMASASTVEFLPGFHGSLPFHLETGYVGVGEGEEVQVFYYFIKSENNPQEDPLLLWQSGGPGCSGFVGLVHEIGPLAFINQQYNGSLPSLVLRSQSWTKVSSIIFVDLPIGSGFTYTKAKGVVEQSDWTLIHHAHQFLRKWLINHPEYMSHKVYPAGDSYAGILIPALFQEISHANENGVQPRINIQGYILGNPVTTKLEINYAIPFAHGMGLISDELYESLQQNCRGNYQNIDPRNLLCLRDFQSFQELTAEVDHAQILEPAFCGYDLNSMPQGSTILKRSLTQKVKASDYTASRCRRYEYFEAVYWANNDDVRQALHVRKGTVGHWERCRNITTYKFDINSSFHFHVNLSAKGYRSLIYSGDHDMIVSFLSTQAWIRSLNYSIVHDWRPWHFNSQVAGYTRTYSNRMTFATVKGAGHTVPEFKPEECLAMFKRWIANENL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4793g00018 467 Gene3D alpha/beta hydrolase 26 294 IPR029058 -
Pral4793g00018 467 FunFam Carboxypeptidase 370 464 - -
Pral4793g00018 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 451 IPR001563 GO:0004185|GO:0006508
Pral4793g00018 467 Gene3D - 321 467 - -
Pral4793g00018 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Pral4793g00018 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Pral4793g00018 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Pral4793g00018 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Pral4793g00018 467 Pfam Serine carboxypeptidase 37 464 IPR001563 GO:0004185|GO:0006508
Pral4793g00018 467 FunFam Serine carboxypeptidase-like 11 27 467 - -
Pral4793g00018 467 SUPERFAMILY alpha/beta-Hydrolases 33 465 IPR029058 -
Pral4793g00018 467 FunFam Carboxypeptidase 321 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4793g00018 Pral-Chr4793 218108 223917 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4793g00018 29 56 Calmodulin-binding Proteins AT2G22960 64.286 6.21e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4793g00018 K16296 - gmx:100794342 571.622