Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4793g00016 ATGACTTCTTTTTTGAAGCCTGAGAATGCTCTGAAAAGAGCGGAAGAATTGATTAATGTTGGACAGAAGCAGGATGCTTTGCAAACTCTACATAGCCTTATCACTTCAAAAAGATATAGAGCATGGCAGAAGACACTTGAAAGGATAATGTTTAAATATGTAGAACTGTGCGTAGACATGCGGAAAGGGCGATTTGCGAAGGATGGGCTCATTCAGTATCGTATTATATGTCAGCAAGTTAATGTCAGTTCACTGGAGGAGGTGATCAAGCATTTCATGCATCTGTCAACGGAGAAGGCTGAACAAGCTCGCAGCCAGGCACAGGCATTGGAAGAGGCTCTCGATGTTGATGATTTAGAGGCAGATAAAAGGCCTGAGGACTTGATGCTTAGTTATGTGAGTGGAGAGAAAGGAAAAGAGAGATCTGACAGGGAGCTTGTTACTCCATGGTTTAAATTTCTCTGGGAAACGTATAGGACAGTGCTTGAAATATTACGCAACAATTCAAAACTGGAAGCTCTATATGCTATGACAGCACATCGGGCTTTTCAATTTTGTAAGCAATATAAGCGAACAACAGAGTTCCGCAGACTTTGTGAAATTATAAGAAACCATCTTGCCAATCTTAATAAATATCGAGACCAACGTGACCGACCTGATCTTTCAGCACCTGAAAGCCTGCAACTATATCTAGATACCAGATTTGAGCAGCTGAAAGTTGCAACTGAGCTTGAACTCTGGCAGGAAGCTTTTAGATCTATTGAAGATATACATGGACTTATGTGCATTGTCAAGAAAACACCCAAGGCATCATTGATGGTTCTCTACTATGCTAAGCTGACAGAAATATTTTGGATATCGTCAAGCCATCTATATCATGCATATGCGTGGTTCAGGCTCTTTTTACTGCAGAAGAACTTTAATAAGAATCTGAGCCAGAAAGATCTTCAATTGATAGCTTCGTCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCCCATGATCACACTCAAGGTGCATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAATTTGAGGATGGCTAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGAGAGCAGAGAAGTGCTTTCAAGGTCAGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGTGACTCAGGAAGTGAAGGACATTTATCATCTCTTGGAACATGAATTTCTTCCCCTGGATCTTCCATCGAAAGTTCAGCCTCTGCTAACTAAAATATCTAAGTTGGGGGGTAAGCTCTCCACTGCTTCTTCTGTCCCTGAGGTGCAGCTGTGTCAGTATGTCCCAGCATTGGAGAAACTAGCTACCTTGAGGTTGCTACAGCAGGTGTCCAACGTTTACCAGACAATGAAGATTGAGACCTTATCTGGAATGATCCCCTTTTTTGATTTTTCTGTTGTGGAGAAGATTTCTGTGGATGCTGCTAAGCATAAGTTTGTATCCATGAAAGTTGATCACATGAGGAAGGTTGTAGTTTTCTGCAAGACGAATCTAGAGTCTGATGGCTTAAGGGATCACTTGGCTAAGTTTGCTGAACATCTGAACAAGGCGAGACAAATGATTTATCCTCCTGATAGAAAACCATCAAAAATTGGAGCTTTGCTTCCCTCCTTGAATGAAGTTGTTGCCAAGGAACACAAGAGGCTTCTTGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAACGGCAGCTTCTTGAAATGGAAAGAGAGGAGGAATCAAAGAGATTGAGACTGCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGAGGAAGAATCAGAGAATTCTCAGAGAAATAGAAGAGAGAGAAATGGAAGAAGCTCAAGCATTGCTTCAGGAAGCTGAGAAGCGTATTAAAAAGAAGGGAAAGAAGCCAATCATTGAGGGTGAAAAACTGACCAAGCAAACACTGATGGAGTTGACGTTGACTGAACAACTCCGGGAAAGACAAGAAATGGAAAAGAAACTACAAAAATTAGCTAAAACAATGGACTATTTGGAAAGAGCCAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCTGCATATCAAAAGCGCCTAGTGGAAGAAAAGCTTCTCCATGAGCGTGAGCAACAGCTTGAGGTTGAAGTTAGCAAACAGCGCCATGAGGGAGATCTCAAGGAGAAGGAAAGGCTGGCTCGTATGGTTGGCAATAAAGAGATTTATCAAGAGAGAGTCGTCAGTTCTCGTCAGGCAGAATTTAATAGGTTGAGTCGGGAAAGAGAGGAGCGAATCTCAAGGATTTTACAGGCCAGGAGACAAGAGAGGGAAAAGATGAGGAAGTTGAAGTATTATCTGAGGTTAGAAGAAGAGAGACAGGAAAAATTGCGTGAAGAGGAGGAAGCTCGGAAGCGTGAAGAGGCTGAGAGGCGGAAGAAGGAAGAGGCTGAGCACTTGGCGAAATTGGCTGAGATACTAGAAAAGCAGAGGCAAAGAGAGCGGGAACTTGAAGAGAAGGCGGAGAGGCAGAAGAAAGAAGCACTGTTTGGCAGAAGTGGTGAAGCAGCTGTGAAGCCTCTTGAACCTCCAGCCCGCCCATTGGAGGCTGGACCCACCGCTACTGCACCAGCTGCGGCAGGGGCTGCAGCTGCCTCTGCCCCTGGGAAATACGTACCTAAGTTCCGTCGTGAGAGGGCTGAAGTCCCAAACCCTGCTGCTCCTTTAGAAGCTGATCGATGGACAAACCCTAGCAGGCAGGATGGTGACAGATGGCGTAGTGATGACCGAAGACCTGCTTTTGGTGCTGGTGGGGGTTCAAGGTCGTCGTCAGCATGGTCCTCATCCAGGCGTGGAGCTGATCGTTGA 2898 0.4431 MTSFLKPENALKRAEELINVGQKQDALQTLHSLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKASLMVLYYAKLTEIFWISSSHLYHAYAWFRLFLLQKNFNKNLSQKDLQLIASSVVLAALSVPPHDHTQGASHLELEHEKERNLRMANLIGFNLESKPESREVLSRSALLAELVSKGVMSCVTQEVKDIYHLLEHEFLPLDLPSKVQPLLTKISKLGGKLSTASSVPEVQLCQYVPALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAAKHKFVSMKVDHMRKVVVFCKTNLESDGLRDHLAKFAEHLNKARQMIYPPDRKPSKIGALLPSLNEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKLTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKRLVEEKLLHEREQQLEVEVSKQRHEGDLKEKERLARMVGNKEIYQERVVSSRQAEFNRLSREREERISRILQARRQEREKMRKLKYYLRLEEERQEKLREEEEARKREEAERRKKEEAEHLAKLAEILEKQRQRERELEEKAERQKKEALFGRSGEAAVKPLEPPARPLEAGPTATAPAAAGAAAASAPGKYVPKFRRERAEVPNPAAPLEADRWTNPSRQDGDRWRSDDRRPAFGAGGGSRSSSAWSSSRRGADR 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4793g00016 965 Coils Coil 615 649 - -
Pral4793g00016 965 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Pral4793g00016 965 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 963 IPR027512 GO:0005852
Pral4793g00016 965 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Pral4793g00016 965 Coils Coil 796 857 - -
Pral4793g00016 965 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Pral4793g00016 965 Gene3D UVR domain 217 267 - -
Pral4793g00016 965 Gene3D - 268 342 - -
Pral4793g00016 965 Gene3D - 353 493 - -
Pral4793g00016 965 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 953 IPR027512 GO:0005852
Pral4793g00016 965 MobiDBLite consensus disorder prediction 803 965 - -
Pral4793g00016 965 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Pral4793g00016 965 MobiDBLite consensus disorder prediction 803 862 - -
Pral4793g00016 965 MobiDBLite consensus disorder prediction 950 965 - -
Pral4793g00016 965 Pfam PCI domain 373 508 IPR000717 -
Pral4793g00016 965 MobiDBLite consensus disorder prediction 926 941 - -
Pral4793g00016 965 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Pral4793g00016 965 Coils Coil 561 602 - -
Pral4793g00016 965 Coils Coil 667 697 - -
Pral4793g00016 965 Coils Coil 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4793g00016 Pral-Chr4793 181907 188185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4793g00016 1 964 Eukaryotic Initiation Factors Gene Family AT4G11420 71.980 0.0 1330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4793g00016 K03254 - gmx:100782598 1374.38