Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00059 ATGGCTTCTTCTTCTTCTGGTTCTTCCTGGACTTACGACTTGTTCTTGAGTTTTAGAGGCGAAGACACCCGTGACGGTTTTACTTCTGAGCTTTATAGCGCTCTAGGGCGGTCAGGGATCCATGCTTTCATGGACGATGAAGGAGTTGAGAGGGGAGAAGAGATCTCTGCCTCACTATTGCAAGCAATTGAACGATCACGAATTGCGTTGGTAATTTTGTCTCCAGATTATGCATCTTCCAGATGGTGTCTGGATGAACTGGTGAACATAATGGAGTGTCGAAGATCTGCAGCTCAGGTGGTTATTCCCATATTCTATAACACAGATCCGTCTCATGTTCGTAAACAGACAGGTACATATGGTGGAGCGATGAAACGACACGAGCAAAGGTTGGGAGGGGGCGGTGATCGCCGGGTGCTGCGGTGGAGGCAGGCACTCACGGAAATCAGCAACCTTTCCGGGTTTGATTCCGGAACATTTCGGTCTGAAGTTGAGCTGATTGATACCATTGTGAAGGATGTTTTAGAGAAAGTAGATGCTGGACAATTGTTTGTTGCTGAGCATCCAGTGGGAATAGAGTCTCGAGTTCAGCAACTGGCAAGTAAATTGTCAAAAAAGAGATTTAGAAAAGTTCATATTATCGGCCTCTGGGGGATGGGAGGCGTTGGTAAAACTACTGTTGCCAAAGCCTTTTACAATACAATTGGTCATACGTTTAGAAGAGCAAGAAGTTTTCTTGCGAAGATAAGAGAAAATTCAAAGCATTCTAATGACGTAGTTAATTTGCAAAAGCAACTCATTTCTGATATCATTAATACAGAAGTTTTCAAGGTACCTAATATTGATAGAGGGAAAAGAATAATTCAAGAAAGATTTCCCAACATAAAAGCATTTGTTGTATTGGATGATGTGGATAGTGTCAATCAGCTGAATACATTATGTGGAAGTCTTGAATGGTTTTGTCCTGAGAGTATAATAGTCATAACAACTAGAGATCTCCATCTGCTTAGTGTCATTAGAGCTGACTACAAGTATAGAATGAGAACGATGGATGAAATTGAGTCACTCGAGCTTTTTAGTTGGCATGCTTTTAAGCAAGAAGCTCCCCTTGAAAACTTCATAGAACTTTCTAAAAATGTAGTTGCTTACTGTGGTGGACTTCCTCTAGCTCTTGAAGTGCTTGGTTCTTATTTGTTTGACAGAAAAATTGAAGAATGGGAGGATGTCTTGTCCAAATTAGAAAGGATTCCGAATGATGAGATACAAGCAAAGTTAAAAATAAGTTTTGATGGTTTAAAGGATGATATGGAGAAGAATATATTTCTTGATATTTGTTGCTTCTTTTTCAATAAGGATAGAAACTATGCCACGCACATATTAAATGGATGTGGATTTAATGCAAAAATAGGTATAACAACTCTCATTGAGCGAAGCCTGATAAATGTTAATAGGAACAACAACAAGCTTGAAATGCATGACTTATTACGTGATATGGGAAGAGAAATCATTTGTGGAAACCCACGAAAGGACCCTGAGGATCGCAGTAGATTGTGGTTTCAAGAGGATGTAACTGAAGTGTTAATGCAAAATACAGGAACAAAAGTTATTGAGGGCATATCCCTGAAAAAGCCCCATGAAGTGTGTGAGATTGATTCTGAGGCATTCAAGGCAATGAGAAAACTCAGATTGCTCCAACTAGAGTATGTAAATCTTGAAGGAGATTATAGGCATCTTTCAAATAAGCTAAGGTGGCTTTGTTGGCGTGGATTTCCTTTAAAATCCATACCTGACAGCTTGTACCAGAAAAACTTAGTTGCTATTGACTTTAGATACAGCAAGCTCAGGCTAGTTTGGAAGAAACCCCAAGTATCAATTTGTCCTTCCCCCCTTTTTAAATGCTTTAAGCTGTCAATATTATAA 1920 0.3953 MASSSSGSSWTYDLFLSFRGEDTRDGFTSELYSALGRSGIHAFMDDEGVERGEEISASLLQAIERSRIALVILSPDYASSRWCLDELVNIMECRRSAAQVVIPIFYNTDPSHVRKQTGTYGGAMKRHEQRLGGGGDRRVLRWRQALTEISNLSGFDSGTFRSEVELIDTIVKDVLEKVDAGQLFVAEHPVGIESRVQQLASKLSKKRFRKVHIIGLWGMGGVGKTTVAKAFYNTIGHTFRRARSFLAKIRENSKHSNDVVNLQKQLISDIINTEVFKVPNIDRGKRIIQERFPNIKAFVVLDDVDSVNQLNTLCGSLEWFCPESIIVITTRDLHLLSVIRADYKYRMRTMDEIESLELFSWHAFKQEAPLENFIELSKNVVAYCGGLPLALEVLGSYLFDRKIEEWEDVLSKLERIPNDEIQAKLKISFDGLKDDMEKNIFLDICCFFFNKDRNYATHILNGCGFNAKIGITTLIERSLINVNRNNNKLEMHDLLRDMGREIICGNPRKDPEDRSRLWFQEDVTEVLMQNTGTKVIEGISLKKPHEVCEIDSEAFKAMRKLRLLQLEYVNLEGDYRHLSNKLRWLCWRGFPLKSIPDSLYQKNLVAIDFRYSKLRLVWKKPQVSICPSPLFKCFKLSIL 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00059 639 Gene3D - 179 345 IPR027417 -
Pral4792g00059 639 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 180 - -
Pral4792g00059 639 Pfam NB-ARC domain 193 419 IPR002182 GO:0043531
Pral4792g00059 639 Pfam TIR domain 12 178 IPR000157 GO:0007165
Pral4792g00059 639 Gene3D - 8 178 IPR035897 -
Pral4792g00059 639 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 155 IPR035897 -
Pral4792g00059 639 Gene3D - 349 433 IPR042197 -
Pral4792g00059 639 PRINTS Disease resistance protein signature 291 305 - -
Pral4792g00059 639 PRINTS Disease resistance protein signature 384 398 - -
Pral4792g00059 639 PRINTS Disease resistance protein signature 213 228 - -
Pral4792g00059 639 ProSiteProfiles TIR domain profile. 10 178 IPR000157 GO:0007165
Pral4792g00059 639 Coils Coil 561 581 - -
Pral4792g00059 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 444 IPR027417 -
Pral4792g00059 639 SMART till_3 11 152 IPR000157 GO:0007165
Pral4792g00059 639 SUPERFAMILY "Winged helix" DNA-binding domain 419 527 IPR036390 -
Pral4792g00059 639 Gene3D Ribonuclease Inhibitor 520 637 IPR032675 -
Pral4792g00059 639 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 617 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00059 Pral-Chr4792 532194 534965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00059 8 626 WRKY Transcription Factor Family AT4G12020 28.503 2.89e-68 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00059 - - pcin:129287706 825.469