Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00057 ATGAGAATAGAGCCACAAGTTCATGAACCAAAAGTTGATGAATGGTTCAATTATGATGTGTTCTTGAGTTTTAGAGGTGAAGACACACGTCAGGGTTTCACTTCTCATCTTTATAGGGCTCTAAGACGGTCAGGAATCCATGCCTTCATGGACGATTCAGGGCTTGAAAGGGGAGAACAGGTCTCTGCCTCATTAATGCAAGCAATTGAAAGATCAAAAATTGCGTTGGTAATATTTTCTCCAAAGTATGCTGCTTCCAGGTGGTGTCTGGATGAACTGGTGAAGATAATGGAGTGTCGAAGAAGTCTAATAATTGAGGTGGCTATCCCCATATTCTATGAAGTAGATCCGTCTGATGTTCGTCATCAGAGAGGCAGCTATGGTAAAGCAATGAAACGACACGGAAAAAGGTTGGGAAGGGAGAATGATGGGGTGATGCGGTGGAGGGAGGCACTCAAGGAAGCTGCCAACATTTCCGGCCTTAAATCTTCAGCATATCGGTCTGAAAGTGAGTTGATTGAGACTATTGTTGAGGATGTTTCTAAAAGAGTAGACCAGGGACAATTATTTGTTGCTGAGCATCCAGTGGGAATAGAATCACGGATTCATAAATACACAATTGAATGGTTAGAAAAGAGATCTCAAAAACCTCTTATCATAGGCCTCTGGGGGATGGGAGGCATCGGCAAAACAACTGTTGCCAAAGGCATCTACAATACAATTGGTCGTAAGTTTAAAAGAGCAAGAAGTTTTCTTGCAGATATAAGAGAAAATTCAAAAGATGCTAATGGCTTAGTTGGTTTGCAAAAGCAATTAATTTCTGATATCATTAAGACAGATTTTTTTAAGATACCTAATATTGATAGAGGGAAAAGAATAATTCAGGAAAGATTTCCCACCATAAAAGTGTTTGTTGTATTGGATGATGTGGATAGTGTCAATCAACTGAACACATTTTGCGGGAGTATTGACTGGTTTTGTCCTGGGAGTATAATATTCATAACAACTAGAAATCTACGTTTGCTTGATGCTATTAATGCTGACCATAAGTATCAAGTGACAGAAATGAGCGGAATGGAGTCTCTTGTGCTTTTCAGTTGGCATGCCTTTAAGCAACCACAACCCTCTAAAGACTTTTTAAAATTTTCTAAAGAGGTAGTTGCCTACTGTGATGGACTTCCACTGGCTCTTGAAGTCCTTGGTTCTTATCTCTATAAGAGAGAAATTACACAATGGGAGGTTGCATTGTCCAAACTACAAAGGATTCCTAAGGAAGATGTACACAAAAAGTTAAAAATAAGTTATGATGGATTGGACGACCATACAGAAAAGGATATTTTCCTTGACATATGTTGCTTTTTTATCAACAAGGACAGCAACTATGTTACACAGATATTAGATGGTTGTGAACTTCATGCAAAAAATGGATTACAGATCCTCATAGAGCGGAGCCTGGTGAAAGTAGGTAGATATGAAAAGCTTGAAATGCATGCTTTATTACAAGAAATGGGAAAAGAAATCATCCGTGGAAGCCCACCTAAAGATCCTGAGAAACGTAGCAGACTATGGTCTCAAGAAGATGTGCTTGATGTGTTAACAAATCATGCAGGAACTAAAGCTATTGAGGGTATCTCTCTGATGGTACCAAAAAACCATAGAGATCCCATCGATTCTAAGGCATTTAAGAAGATGATGAAACTCAGATTGCTCCAACTAGACTATGTCAATCTTAAAGGAGATTATAAACATCTTTCCAAAAAGCTGAAGTGGGTTCGGTGGCATGGATTTCCATCAAAATACACTCCAAACAACTTTTACCAAGAAAAACTAGTTGCTATTGACTTCAAATATAGCAATCTCAAAGTAGTTTGGAAAGAGTCCAAGAAGTTGCCAATGTTGAAGACACTCAATCTCAGTCATTCATCTTCCTTGATACAAACTCCTGATTTTACATATCTACCAAACCTTGAAAAGCTTATGATGAAAGATTGTAAGAGCTTGATTTTAATTCACGAGAGCATTGGGGATCTAAAAACTCTCCTTCATCTTAATCTAAAAGGTTGCAAGAGTCTCAAAGATCTTCCTAGAAGCATCTACAAGTTGAAATCATTGAAGATTTTCATTATTTCTGGGTGTTCATTGATTGACCATTTAGAAGAAGATATTGAGCAAATGGAGTCCTTGACGACTCTTATGGCAGATAACATTTCCATAACACAACTACCCAAGTCATTAGCAAGATTGGAAGGGCTTAAGCGTGGAGATGTATCTTTCGCTGGTCATGAAGGAAAAGGGCAAGATATATTTCCTTCTCTCATATGGTCTTGGATGTCACCTCATGATTTTCCTCCATCCCGTATTGAAGAATCTGTGCAAGGCGTATCATCTATAGTTGCCTCAATTGGATGGAATAGTGGCTTGCGTGGTCTATGTCAATTTCTGGGCGATCTTGTGAAGCTTCCAGGTACGTGGGAGCAATGTCGATCACAGTTTCGATTTAATCAGAGAATGGCAAAACTTTTGGATGCATTGTGTGAGAAAAATTTTATGGAATTTAAATCAACTCAGGATACACCCGAGATCTTAATAATGGAAGCTTCTGCGTCATCTAAGGGCCATGATGACCAAGTTCACAGTGCAAGGTCAGCAGATTCCGTCAATTCTCTTTTACTTCAACTGGGAGAGTGCGACAAAGCAGAGTTGCTAAAAGAGGAAATTTCACAGGGATGGAAGTATGGTGGGTGGGATGATTCTCACCTACCTGGTGATCAGGATTCTGATTGGTTCGTCTTCAAGGGTGAAGGCTGCTCCGTAATTTTGAAGGTGCCACAAGTCATAGGTTGTCAGTTGAAAGCGGTGCTTCTCAATGTTGGGTATTCTTGTATGGATGACACAAGGCCTCAATTTCTCATAAATGTTCTAATCATTAACCACACAAAGGATGCGATTAAACTACTGAAGGGGGACCCAGCAACTTTCCCTGAAGATGCAGAATGGCAGAGTATCATTTCAAGTTTTCAACTTGGTGATATCGTGCAGCTTATTATAAGTATTGGGCCTCAATTTCATGTGAAGAAGATTGCAGCGTACGTGATTTATGACGGTTCTAAGCGTCGCAGGGTCATTAACTGTCATTATCCTGCTAAAGCTGATCCTAACAGTCATTTCCCTTTCAAAATCTGTCGTGATATGTTCGACAATGTTGTTGACTTTATTTCAATCTTTGTTCTGCAAAAATTTACACAGGATACTGAAAGGACATTCATTATTGACATGTCTGAAGCTAAGCTGATTGATACCCGTGTGAAGGATGTTTTAGAGAAAGTAGATATTGGACAATTGTTTGTTGCTGAGCATCCAGTGGGAATAGAGCCTCGATTTTAG 3384 0.393 MRIEPQVHEPKVDEWFNYDVFLSFRGEDTRQGFTSHLYRALRRSGIHAFMDDSGLERGEQVSASLMQAIERSKIALVIFSPKYAASRWCLDELVKIMECRRSLIIEVAIPIFYEVDPSDVRHQRGSYGKAMKRHGKRLGRENDGVMRWREALKEAANISGLKSSAYRSESELIETIVEDVSKRVDQGQLFVAEHPVGIESRIHKYTIEWLEKRSQKPLIIGLWGMGGIGKTTVAKGIYNTIGRKFKRARSFLADIRENSKDANGLVGLQKQLISDIIKTDFFKIPNIDRGKRIIQERFPTIKVFVVLDDVDSVNQLNTFCGSIDWFCPGSIIFITTRNLRLLDAINADHKYQVTEMSGMESLVLFSWHAFKQPQPSKDFLKFSKEVVAYCDGLPLALEVLGSYLYKREITQWEVALSKLQRIPKEDVHKKLKISYDGLDDHTEKDIFLDICCFFINKDSNYVTQILDGCELHAKNGLQILIERSLVKVGRYEKLEMHALLQEMGKEIIRGSPPKDPEKRSRLWSQEDVLDVLTNHAGTKAIEGISLMVPKNHRDPIDSKAFKKMMKLRLLQLDYVNLKGDYKHLSKKLKWVRWHGFPSKYTPNNFYQEKLVAIDFKYSNLKVVWKESKKLPMLKTLNLSHSSSLIQTPDFTYLPNLEKLMMKDCKSLILIHESIGDLKTLLHLNLKGCKSLKDLPRSIYKLKSLKIFIISGCSLIDHLEEDIEQMESLTTLMADNISITQLPKSLARLEGLKRGDVSFAGHEGKGQDIFPSLIWSWMSPHDFPPSRIEESVQGVSSIVASIGWNSGLRGLCQFLGDLVKLPGTWEQCRSQFRFNQRMAKLLDALCEKNFMEFKSTQDTPEILIMEASASSKGHDDQVHSARSADSVNSLLLQLGECDKAELLKEEISQGWKYGGWDDSHLPGDQDSDWFVFKGEGCSVILKVPQVIGCQLKAVLLNVGYSCMDDTRPQFLINVLIINHTKDAIKLLKGDPATFPEDAEWQSIISSFQLGDIVQLIISIGPQFHVKKIAAYVIYDGSKRRRVINCHYPAKADPNSHFPFKICRDMFDNVVDFISIFVLQKFTQDTERTFIIDMSEAKLIDTRVKDVLEKVDIGQLFVAEHPVGIEPRF 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00057 1127 Gene3D - 16 183 IPR035897 -
Pral4792g00057 1127 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 847 IPR044974 GO:0006952
Pral4792g00057 1127 SUPERFAMILY "Winged helix" DNA-binding domain 427 532 IPR036390 -
Pral4792g00057 1127 Gene3D Ribonuclease Inhibitor 518 772 IPR032675 -
Pral4792g00057 1127 Pfam TIR domain 17 184 IPR000157 GO:0007165
Pral4792g00057 1127 Gene3D - 356 439 IPR042197 -
Pral4792g00057 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 450 IPR027417 -
Pral4792g00057 1127 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Pral4792g00057 1127 Gene3D - 184 352 IPR027417 -
Pral4792g00057 1127 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 186 - -
Pral4792g00057 1127 Pfam NB-ARC domain 207 436 IPR002182 GO:0043531
Pral4792g00057 1127 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Pral4792g00057 1127 PRINTS Disease resistance protein signature 628 644 - -
Pral4792g00057 1127 PRINTS Disease resistance protein signature 297 311 - -
Pral4792g00057 1127 PRINTS Disease resistance protein signature 219 234 - -
Pral4792g00057 1127 PRINTS Disease resistance protein signature 390 404 - -
Pral4792g00057 1127 SUPERFAMILY L domain-like 509 772 - -
Pral4792g00057 1127 SMART till_3 17 158 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00057 Pral-Chr4792 506634 516126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00057 10 761 WRKY Transcription Factor Family AT4G12020 29.351 5.55e-76 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00057 - - pcin:129287706 1198.34