Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00048 ATGATGTTGATTATAGTTTCACGGATATTTAATATTGTATACAGGCAAGAAAGTACGCTGATTAAGACTATTGTTAAGCATGTTTCAGACAAATTAGACATTGGACAATTATTTGTGGCCGAGAATTCAGTGGGAATGGAATCACGAGTTCATGAACTAACAATTGAATGGTCACAAAATATATCCCAAAAAGCTCTTATCATAGGCCTCTGGGGGATGAGAGGCATTGGCAAGACAACTGTTGCCAAAGCCATTTATAATAAAATGGGTCGTCAGTTTGAAGCCAGAAGTTTCCTGGCAAATATAAGAGAGAACTCAAAGCATGCTAATGACCAAGTTAATTTGCAAAAGCAACTCATTTCTGATATCACTAAGACACAAGTTTTCAAGATAGCTAACACTGATAGAGGAAAAAAGATAATTCAGGAAAGATTTCCTGACATAAAAGCATTTGTTGTGCTGGATGATGTGGATAGTGTCAATCAACTAAACACATTATGTGGGAGTCTTAAATGGTTTTGTTCAGGGAGCATAATAATCATAACAACTAGAGATTTGCATATGCTTAATGTGCTTAAAGCTGACCATAAGTATGGGATGAGAGGATTGAATGAAACTGAGTCTCTCAACCTTTTCAGTTGGCATGCCTTTAAGCAAGCAGCCCCCTTTGAAAACTTCACAGAACTCTCTAAAAATGCAGTCACTTACTGTGGTGGACTTCCATTGGCTCTTGAAGTCCTTGGTTCTCATTTGTTTGATAGAGAAATTGAAGAATGGGAGTATGTGTTGTCCAAGCTAGAAAGGATTCCAAATGATGAGAGACAAGCAAAGTTAAAAGTAAGTTTTGAAGGTTTAGAACATGGGGAAGAATACGTTTCTTGA 882 0.3696 MMLIIVSRIFNIVYRQESTLIKTIVKHVSDKLDIGQLFVAENSVGMESRVHELTIEWSQNISQKALIIGLWGMRGIGKTTVAKAIYNKMGRQFEARSFLANIRENSKHANDQVNLQKQLISDITKTQVFKIANTDRGKKIIQERFPDIKAFVVLDDVDSVNQLNTLCGSLKWFCSGSIIIITTRDLHMLNVLKADHKYGMRGLNETESLNLFSWHAFKQAAPFENFTELSKNAVTYCGGLPLALEVLGSHLFDREIEEWEYVLSKLERIPNDERQAKLKVSFEGLEHGEEYVS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00048 293 PRINTS Disease resistance protein signature 237 251 - -
Pral4792g00048 293 PRINTS Disease resistance protein signature 144 158 - -
Pral4792g00048 293 PRINTS Disease resistance protein signature 67 82 - -
Pral4792g00048 293 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 287 IPR044974 GO:0006952
Pral4792g00048 293 Pfam NB-ARC domain 58 270 IPR002182 GO:0043531
Pral4792g00048 293 Gene3D - 202 286 IPR042197 -
Pral4792g00048 293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 287 IPR027417 -
Pral4792g00048 293 Gene3D - 23 198 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00048 Pral-Chr4792 410955 411836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00048 68 292 WRKY Transcription Factor Family AT5G45050 30.088 9.93e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00048 - - pcin:129301479 355.525