Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00047 ATGGCTGCTTCTTCTTCTTCCAGTTCTTCCTGGACTTACGATGTGTACTTGAGTTTTAGAGGCCAAGACACTCGTCACGGTTTCACTACTCATCTTTATAACGCTCTGAAACAGAGAGGAATCCATGTTTACGTGGACGATGCGGAGGTTGAGAAGGGAGATGATATCTCTGCTGAATCATTTTTGCAGGCAATTGAAGCATCACAAATTGTGTTAGTAATTTTCTCTCCAAATTATGCTTATTCGCGAAATTGTCTGGATGAACTGGTAAAGATAATGGAGTGTCAAAGAAGGCTAGCTCAGGTGGTTGTGCCCATATTCTATAAAGTAGATCCGTTTGATGTTCGTTATCTGCAAGGCACATATGGTGAAGCAATGAAACGACACGAGCTAAGGTTGGAATCGGGGAATGACAAGGCGTTGCGGTGGAGCGAGGCACTCCGGGAAATTGCCAGCGTTTCCGGCTTTCATTTAACAACACATCGGAAGGAGAAGGAAGTTGAGATTTCAAAGCTGCTGATGGAAGATATGGGTTTGGCTGGGTTCTTTTCTCTGAAAATTTTGAAGATGAATGGGCTGAATCTCTTGTTTGATATGAGTCTAGGGAAGATGGAAGATGCACATAGCTACTGGTCTGAAAGTGAGCTGCTTAAGAAAATAGTTGAGGAAGTTTCAAGAGTATTATCATTGGCTGAGGAGCATTCAATGAGAATAGAGCCACAAGTTCATGAAGCAAAAGTTGATGAATGGTTCAATTTTGACGTTTTCTTGAGTTTTAGAGGTGAAGACACTCGCCACGGTTTCACTTCTCATCTTTGTAGGGCTCTAAGACAGTCAGGAATCCACACTTTCATGGATGATTCAGGGCTTGAATGGGGAGAACAGGTCTCCGCCTCATTACTGCAAGCAATTGAAAGGTCACAAACTGCATTGGTAATATTTTCTCCAGATTATGCTGCTTCCACGTGGTGTCTGGATGAACTGGTGAAGATAATGGAGTGTCGAACAAGTCTAGCTCAGGTGGCTATTCCCATATTTTATGATGTAGATCCCTCTGAAGTCCGTCACCAGAGAGGCACCTATGGTGAAGCAATGAAACGACATGAGCAAACGTTGGGAAGTGAGAATGATGGGGTGATGCGGTGGAGGGAGGCACTCAAGGCAGCTGCCAACATTTCCGGCTTTAGTTCTTCAGCTTATCGGTTTGAAAGTGAGTTGATTGAGACCATTGTTGAGAGTGTTTCTAAAAAAGTAGACAATGGACAATTATTTGTTGCCAAGCATCCAGTGGGAATAGAATCACGGATTCATGAATTGACAATTGAATGGTCAGGAAAGAGATCCCAAAAGCCTCTTATCATAGGCCTCTGGGGGATGGGAGGCATCGGCAAAACAACTGTTGCCAAAGCCGTCTACAATACAATTGGTCGTAAGTTTAGAAGAGCAAGAAGTTTTCTTGCAAATATAAGAGAAAATTCAAAACATGCTACTGGGTTAGTTAATTTGCAAAAGCAATTAATTTCTGATATCATAAAGATAGATTTTTTCAAAATACCTAATATTGATAGAGGAAAAAAAATAATTCAGGAAAGATTTCCCACCATAAAAGTGCTTGTTGTATTGGATGATGTGGATAGTGTTAATCAACTAAACACATTCTGTGGGAGTATTGAATGGTTTTGTCCTGGGAGTATAATATTCATAACAACTAGAGATCAACATTTGCTTGATGTCATTAATGCTGATCATAAGTATAGAATGAGAGAAATGAATGGAATGGAGCCCCTTGTGCTTTTCAGTTGGCATGCCTTTAAGCAAGCACAACCCTCTGAAAACTTCATAGAATTATCTAAAGAGGTAGTTGCTTATTGTGATGGACTTCCACTTGCTCTTGAAGTCCTTGGTTCTTGTTTGCGTGGGAGAACAATTAAACAATGGAAGGGTGTATTGTCCAAACTACAGAGGATTCCTAATAAAGATGTATACGAAAGGTTAAAAATAAGTTATGACGGATTGGATGACCATACAGAGAAGGACATTTTCCTTGACATATGTTGCTTTTTTATCAACAAGGATAGGAACTATGTCACACAAATATTAGATGGTTGTGAATTTTATGCAGAAGATGGACTACAAATCCTCATAGAGCGGAGCCTAGTAAAAGTTGGTAGGAATAATAAACTTGAAATGCACGATTTATTACAAGAAATGGGGAAAGAAATCATTCGTGGAAGCCCACCGAAACATCCTAAGGAACGTAGCAGGCTATGGTTTCACAAAGATGTGCTTGATGTGTTAACAAAACATTCGGGAACTGAAGCTATTAAGGGTATATCTCTGAAAGCACCAGAAACCCATAGAGAGCGTGTCATTGATTCTGAGGCGTTTAAGGAGATGAAGAAACTTAGATTGCTTCAACTAGATTATGTAAATCTTAAAGGAGATTATCAACATCTTTCTAAAGAGCTCAGGTGGCTTTGTTGGCATAGATTTCCATTAAAATGCATTCCAAAAAACTTTTACCAACAAAATTTAGTTGCTATTGACTTCAAATATAGCAGCCTCAAAGTTGTTTGGAAGAAGCCCCAGCTCCTGGATATGTTGAAGACACTCAATCTCAGTCATTCGTCTTATTTGACACAAACTCCTGATTTTACAAAACTACCAAACCTTGAAAGACTACTGATGAAAGATTGTCCAAGCTTGATTTATATTCATGAGAGCATTGGGCACCCAAAAAATCTTCTTCATGTAAATCTAAAAGATTGCAAAAGTCTCAGATATCTTCCTAGAAACATCTACAAGTTGAAATCTGTCAAAACTCTTATTCTTTCTGGTTGTTCATTGATTGACCATTTAGAAGAAGATATTGAGCAGATGGAGTCCTTGACAACTCTGATGGCAGATAAAACTGCCATAACACAAGTACCCTTTTCATTAGCAAGACTGGAAGGGCTTAAGCACGGATACATATCTTTCCTTGGTCATGAAGGAAGAGCAAAAGACATATTTCCTTCTCTCATATGGACTTGGATGTCACCTAACAATATTGCCCACTCTCCTATTGAAGAATTTGTGCAAAGCATATCAGCCATCGATATCTCAGTTAGACGGAATAGTAGCTTTTGTGGCCTATCTCCATTTCTGGGCGATCTTGTGAAGCTGCGACATATGTGGGAGGAATGTCGACCTCAGTTTCGATTTTATGAAAGAATGGCAAGACTTTTGGATGCCTTGTATGAGACAAATTTTGTGGGATTGGAAGCAACTCAAGATATACCCCAGATCTCATATGCGGAAGCTTCTGCATCATCTGAGGCCCATGACCAACTTCAGATTTCAAGGCCAGCAGATTCCTTGAAATCTCTTTTACTTCAACTTGGAGTGTTAGACAAGATAGACTTGTTCAGAGAGGAAATTTCTCAGGGATGGAATTATGGTGGGTGGGATGATTTTCACCTACCTGGTGATCAGTATCGCGATTGGTTCATCTTTAAGGGTGAAGGACGCTCAGTAATTTTTAAGGTACCTCAAGTCATAGGTTATCGCTTGAAAGCGATGCTTCTCAACGTCAGGTATTCTTCTTGCACGGACACCACAACGCCTCAATTTCTCATGGATGTTCTAATCATTAACCTCACAAAAGCAACAGTAAAACATCTTAAGGGAGACTCGTCAACTTTTCATGAAGATGCCGAGTGGCAGAATATCATTTCAAGTTTTCAACCTGGTGATCTGGTGGAGCTTGTTTTAAGTATTGGACCTCAATATCCTGTGAAGAAGATTGCAGCATACCTGATTTATGACGGTTCTAAGCCTCGCAGGTTTTTGAAATCATCATTATCGCAAAAGCTGATTTGGGTTTGTCGTATAGCGCCGGTACTTCTGATATGTGCTGCAATTTTTAGAAAGGGAAAATGA 3921 0.3996 MAASSSSSSSWTYDVYLSFRGQDTRHGFTTHLYNALKQRGIHVYVDDAEVEKGDDISAESFLQAIEASQIVLVIFSPNYAYSRNCLDELVKIMECQRRLAQVVVPIFYKVDPFDVRYLQGTYGEAMKRHELRLESGNDKALRWSEALREIASVSGFHLTTHRKEKEVEISKLLMEDMGLAGFFSLKILKMNGLNLLFDMSLGKMEDAHSYWSESELLKKIVEEVSRVLSLAEEHSMRIEPQVHEAKVDEWFNFDVFLSFRGEDTRHGFTSHLCRALRQSGIHTFMDDSGLEWGEQVSASLLQAIERSQTALVIFSPDYAASTWCLDELVKIMECRTSLAQVAIPIFYDVDPSEVRHQRGTYGEAMKRHEQTLGSENDGVMRWREALKAAANISGFSSSAYRFESELIETIVESVSKKVDNGQLFVAKHPVGIESRIHELTIEWSGKRSQKPLIIGLWGMGGIGKTTVAKAVYNTIGRKFRRARSFLANIRENSKHATGLVNLQKQLISDIIKIDFFKIPNIDRGKKIIQERFPTIKVLVVLDDVDSVNQLNTFCGSIEWFCPGSIIFITTRDQHLLDVINADHKYRMREMNGMEPLVLFSWHAFKQAQPSENFIELSKEVVAYCDGLPLALEVLGSCLRGRTIKQWKGVLSKLQRIPNKDVYERLKISYDGLDDHTEKDIFLDICCFFINKDRNYVTQILDGCEFYAEDGLQILIERSLVKVGRNNKLEMHDLLQEMGKEIIRGSPPKHPKERSRLWFHKDVLDVLTKHSGTEAIKGISLKAPETHRERVIDSEAFKEMKKLRLLQLDYVNLKGDYQHLSKELRWLCWHRFPLKCIPKNFYQQNLVAIDFKYSSLKVVWKKPQLLDMLKTLNLSHSSYLTQTPDFTKLPNLERLLMKDCPSLIYIHESIGHPKNLLHVNLKDCKSLRYLPRNIYKLKSVKTLILSGCSLIDHLEEDIEQMESLTTLMADKTAITQVPFSLARLEGLKHGYISFLGHEGRAKDIFPSLIWTWMSPNNIAHSPIEEFVQSISAIDISVRRNSSFCGLSPFLGDLVKLRHMWEECRPQFRFYERMARLLDALYETNFVGLEATQDIPQISYAEASASSEAHDQLQISRPADSLKSLLLQLGVLDKIDLFREEISQGWNYGGWDDFHLPGDQYRDWFIFKGEGRSVIFKVPQVIGYRLKAMLLNVRYSSCTDTTTPQFLMDVLIINLTKATVKHLKGDSSTFHEDAEWQNIISSFQPGDLVELVLSIGPQYPVKKIAAYLIYDGSKPRRFLKSSLSQKLIWVCRIAPVLLICAAIFRKGK 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00047 1306 SUPERFAMILY Toll/Interleukin receptor TIR domain 250 395 IPR035897 -
Pral4792g00047 1306 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 175 - -
Pral4792g00047 1306 Pfam NB-ARC domain 448 659 IPR002182 GO:0043531
Pral4792g00047 1306 Gene3D - 416 585 IPR027417 -
Pral4792g00047 1306 Gene3D Ribonuclease Inhibitor 776 1064 IPR032675 -
Pral4792g00047 1306 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 156 IPR035897 -
Pral4792g00047 1306 Gene3D - 250 415 IPR035897 -
Pral4792g00047 1306 SUPERFAMILY L domain-like 743 1062 - -
Pral4792g00047 1306 PRINTS Disease resistance protein signature 531 545 - -
Pral4792g00047 1306 PRINTS Disease resistance protein signature 624 638 - -
Pral4792g00047 1306 PRINTS Disease resistance protein signature 934 950 - -
Pral4792g00047 1306 PRINTS Disease resistance protein signature 453 468 - -
Pral4792g00047 1306 SMART till_3 12 153 IPR000157 GO:0007165
Pral4792g00047 1306 SMART till_3 252 392 IPR000157 GO:0007165
Pral4792g00047 1306 Gene3D - 590 673 IPR042197 -
Pral4792g00047 1306 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 254 986 IPR044974 GO:0006952
Pral4792g00047 1306 FunFam Disease resistance protein (TIR-NBS-LRR class) 249 420 - -
Pral4792g00047 1306 Gene3D - 6 234 IPR035897 -
Pral4792g00047 1306 Pfam TIR domain 13 194 IPR000157 GO:0007165
Pral4792g00047 1306 Pfam TIR domain 252 418 IPR000157 GO:0007165
Pral4792g00047 1306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 684 IPR027417 -
Pral4792g00047 1306 ProSiteProfiles TIR domain profile. 251 418 IPR000157 GO:0007165
Pral4792g00047 1306 ProSiteProfiles TIR domain profile. 11 177 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00047 Pral-Chr4792 396738 404312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00047 862 986 WRKY Transcription Factor Family AT4G12020 33.077 6.80e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00047 - - pcin:129287706 1239.94