Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00044 ATGGTTGATTCTATTGTTTTACGGACATTTATTATTGACAGGTCTGAAGCTGAGCTAGTTAACACCATTGCGAAGGATGTTTTAGAGAAAGTAGATGATGGACAATTGTTTGTTGTTGACCATCCAGTGGGAATAGAGTCTCGAGTTCAGCACCTGGCAAGTAAATTGTCAAAAAAGAGATTTAGAAAAGCTCTTATCATCGGCCTCTGGGGGATGGGAGGCGTTGGTAAAACTACTGTTGCCAAAGCCCTGTACAATACAATTGGTCGTAAGTTTAGAAGAGCAAGAAGTTTTCTTGCAAGTATAAGAGAAAATTCAAAGCATTCTAATGGCCAAGTTAATTTACAAAAGCAACTCATTTCTGATATCATTAATACAGAAGTTTTCAAGGTACCTAACATTGATAGAGGGAAAAGAATAATTCAGGAAAGATTTCCCAACATAAAAGCATTTGTTGTATTGGATGATGTGGATAGTGTCAATCAGCTGAATACATTTTGTGGAAGTCTTGAATGGTTTTGTCCAGGGAGTATAATAGTCATAACAACTAGAGATCTCCATCTGCTTAGTGTTATTAGAGCTGACCACAAGTATAGAATGAGAACAATGGATGAAATTGAGTCACTCGAGCTTTTTAGTTGGCATGCTTCTAAGCAAGAAGCTCCCCTTGAAGACTTCATAGAACTTTCTAAAAATGTAGTTGCTTACTGTGGTGGGCTTCCTCTAGCTCTTGAAGTGCTTGGTTCTTATTTGTTTGACAGAAAAATTGAAGAATGGGAGGAAGTGTTGTCCAAATTAGAAGAGATTCCGAATGATGAGATACAAGCAAAGTTAAAAATAAGTTTTGATGGTTTAAAGGATGATATGGAGAAGAATATATTTCTTGATATTTGTTGCTTCTTTTTCAATAAGGATAGAAATTATGCCACGCACATATTAAATGGATGTGGATTTAAGGCAAAAATAGGTATAACAACCCTCATTGAGCGAAGCCTGCTAAATGTTAATAGGAACAATAACAAGCTTGAAATGCATGGCTTATTACGTGACATGGGAAGAGAAATCATTTGTGGAAGCCCTCGAAAGGACCCTGAGGATCGCAGTAGATTGTGGTTTCAAGAGGACGTAACTGAAGTGTTAATGCAAAATACGGCAACAAAAGTTATTGAGGGCATATCCCTCAAGAAGCCCCATGAAGTATGTGAGATTGATTCTAAAGCATTCAAGGCAATGAGAAAACTCAGATTGCTCCAACTAGAATATGTAAATCTTGAAGGAGATTATAGGCATCTTTCCAATAAGCTAAGGTGGCTTTGTTGGCATGGATTTCCTTTAAAATCCATACCTGACAGCTTGCACCAGAAAAGCTTAGTTGTTGTTGACTTTAAATACAGCAACCTCAGGCTAGTTTGGAAGAAGCCCCAATTGTTGCCATATTTGACAATTCTTATTCTCAGCCATTCACCTCACTTGAGACAAACTCCTGATTTTACAAACCTACCAAACCTTGAAAAGCTAGTGCTGAAAGATTGTCTGAGCTTAGTGTTAATTCACCAGAGCATTGGAGATTTGAAAAAAATTATTTTGGTAAATCTAAAAGACTGCAAATGCCTGAGGGTTCTTCCTAAAAGCATGTACAAGTTGAAATCATTAAGAACTCTCGTTCTTTCTGGTTGTTCATTGATTGACCATTTAGAAGAAGATATTGAGCAGATGGAATCGATGACAGTACTAAAGGCAGATCATACTGCCATAACAGTAATACCCAAGGCCTTAGCAAGATTGGAAGCGCTTAAGCATGGATATGTATCTTTCCCAGGCCGCGAAGGAAGAGCACAAGATGTATTTCCGTCTCTCATATGGTCTTGGATGTCACCCACCGATATTCCCCGGTCCAGCAGTGAAGAATTTTTGCTGAGCATGTCATCTCTAGTTTTTTCTGTTATACAGAATGGCAGATTTCTTGGCCTATCTCCATTTCTGGGCGATCTTGCCAAGCTTCGAGGTATGTGGGAGGAATGCCGATCAGAGTCTCGATTCAATGGAGAAATGGCAAGACTTACGGATGCCTTGTATGGGACAAACTTCATGGAATTGGAATCCCCACCAAGCAGATCCGGGGAAGCTTCTACATCACTTGACGGTCATGATCAAGTTCACAATGCAACATCGGCAGATTTCCTCAATTCTCTTTTAATTCAAATGGCAGAGAGCTACAAGGTAGACTTGCTGAGAGACAAAATACTACAGGGATCGAGTTGCGGCGGGTGGGATGATTCTAACCTCCCTGGTGATCAGTATCCGGACTGGTTCATCTACAAGGGCGAAGGACGCTCAGTAATTTTTAAGGCACCTCAAGTCATAGGGTGTCACTTGAAAGCGATGCTTCTGAATGTTGCATATTCTTCTTCCATGGATAACACAAGGCCTCAATTTTTCATAAATGTTTTGATAATTAACTACACGAAGGCTTATGTTAAACAATGTAAGGGAGACTCGGCAACTTTCCATGAAGATGCGGAATGGCAAAGTATCATTTCAAGTATTCAACCTGGTGATCAAGTGGAGCTTATTTTAAGTATTGGGCCTCAATTCCCTGTGAAGAAGATTGTAGCATACTTGATTTATGATGGTTCTATGTGA 2643 0.3931 MVDSIVLRTFIIDRSEAELVNTIAKDVLEKVDDGQLFVVDHPVGIESRVQHLASKLSKKRFRKALIIGLWGMGGVGKTTVAKALYNTIGRKFRRARSFLASIRENSKHSNGQVNLQKQLISDIINTEVFKVPNIDRGKRIIQERFPNIKAFVVLDDVDSVNQLNTFCGSLEWFCPGSIIVITTRDLHLLSVIRADHKYRMRTMDEIESLELFSWHASKQEAPLEDFIELSKNVVAYCGGLPLALEVLGSYLFDRKIEEWEEVLSKLEEIPNDEIQAKLKISFDGLKDDMEKNIFLDICCFFFNKDRNYATHILNGCGFKAKIGITTLIERSLLNVNRNNNKLEMHGLLRDMGREIICGSPRKDPEDRSRLWFQEDVTEVLMQNTATKVIEGISLKKPHEVCEIDSKAFKAMRKLRLLQLEYVNLEGDYRHLSNKLRWLCWHGFPLKSIPDSLHQKSLVVVDFKYSNLRLVWKKPQLLPYLTILILSHSPHLRQTPDFTNLPNLEKLVLKDCLSLVLIHQSIGDLKKIILVNLKDCKCLRVLPKSMYKLKSLRTLVLSGCSLIDHLEEDIEQMESMTVLKADHTAITVIPKALARLEALKHGYVSFPGREGRAQDVFPSLIWSWMSPTDIPRSSSEEFLLSMSSLVFSVIQNGRFLGLSPFLGDLAKLRGMWEECRSESRFNGEMARLTDALYGTNFMELESPPSRSGEASTSLDGHDQVHNATSADFLNSLLIQMAESYKVDLLRDKILQGSSCGGWDDSNLPGDQYPDWFIYKGEGRSVIFKAPQVIGCHLKAMLLNVAYSSSMDNTRPQFFINVLIINYTKAYVKQCKGDSATFHEDAEWQSIISSIQPGDQVELILSIGPQFPVKKIVAYLIYDGSM 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00044 880 Gene3D - 27 198 IPR027417 -
Pral4792g00044 880 Gene3D - 202 286 IPR042197 -
Pral4792g00044 880 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 619 IPR044974 GO:0006952
Pral4792g00044 880 SUPERFAMILY "Winged helix" DNA-binding domain 272 380 IPR036390 -
Pral4792g00044 880 SUPERFAMILY L domain-like 402 667 - -
Pral4792g00044 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 297 IPR027417 -
Pral4792g00044 880 Gene3D Ribonuclease Inhibitor 373 670 IPR032675 -
Pral4792g00044 880 Pfam NB-ARC domain 46 272 IPR002182 GO:0043531
Pral4792g00044 880 Coils Coil 414 434 - -
Pral4792g00044 880 PRINTS Disease resistance protein signature 144 158 - -
Pral4792g00044 880 PRINTS Disease resistance protein signature 546 562 - -
Pral4792g00044 880 PRINTS Disease resistance protein signature 66 81 - -
Pral4792g00044 880 PRINTS Disease resistance protein signature 237 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00044 Pral-Chr4792 371115 374269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00044 477 598 WRKY Transcription Factor Family AT4G12020 31.148 3.80e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00044 - - pcin:129287706 1106.28