Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00041 ATGGCTTCTTCTTCTTCTTCTAGTTCTTCCTGGACTTACGACTTGTTCTTGAGTTTTAGGGGCGAGGACACTCGTGACGGTTTTACTTCTGATCTTTATAGCGCTCTAGGACGGTCAGGGATCCATGCTTTCATGGACGATGTAGACGTTGAGAGGGGAGAAGAGATCTCTGCCTCATTATTGCAAGCAATTGAACGATCACGAATTGCGCTGGTAATTTTGTCTCCCGATTATGCATCTTCCAGATGGTGTCTGGATGAACTGGTGAATATAATGGAGTGTCGAAAATCTGCAGCTCAGGTGGTTATTCCCATATTCTATAACACAGATCCGTCTCATGTTCGTAAACAGACAGGCACATATGGTGAAGCGATGAAACGACATGAGCTAAGGTTGGGAGGGGGCGGTGATCGCCAAGTGTTGCGGTGGAGGCAGGCACTCACAGAAATCAGCAACCTTTCCGGGTTTGATTCCGGAACATTTCGGTCTGAAGTTGAGCTGCTTGATACCGTTGTGAAGGATGTTTTAGAGAAAGTAGATGCTGGACAATTGTTTGTTGCTGAGCGTCCAGTAGGAATAGAGTCTCAAGTTCGGAAATTGACAAGTAAATTGTCAAAAAAGACATTAACAAAGGCTCTTATCATTGGCCTCTGGGGGATGGGAGGCGTTGGCAAAACAACTGTTGCCAAAGCCTTTTACAATACAATTGGTCGTACATTTAGAAGAGCAAGAAGTTTTCTTGCACAGATAAGAGAAAATTCAAAGCATTCTAATGACCTAGTTAATTTGCAAGAGCAACTCATTTCTGATATCATTAATACAGAAGTTTTCAAGATACCTAACATTGATAGAGGGATAAAGATACTTCAAGAAAGACTTCCCCACATAAAAGCATTTATTGTATTGGATGATGTGGATAGCGTCAATCAGCTAAACGCTTTATGTGGAAGTCTTGAATGGTTTTGTCCTGGGAGTATAATAGTCATAACAACTAGAGATCTGCATCTGCTTAGTGTCATTAGAGCTGATCACAAGTATAAAATGGAAACAATGAATGAAATTGAGTCACTCGAGCTTTTCAGTTGGCATGCCTTTAAACAAAAAGCTCCCCTTGAAAACTTCATAGAACTTTCTAAAAGTGTAGTTGCTTACTGCGGAGGACTTCCTCTGGCTCTTGAAGTCCTTGGTTCTTATTTGTTTGATAGAGAAATTGAAGAATGGGAGGATGTGTTGTCCAAACTAGAAAGGATTCCAAATGATGAGATACAAGCAAAGTTAAAAATAAGTTTTGATGGATTAAAGGATGATATGGAGAAGAATATATTTCTTGACATATGTTGCTTCTTTATCAATAAGGATAGAAACTATGCGACGCATATATTAAATGGATGTGGATTTAAAGCAAAAATCGGAATAACAACCCTCATTGAGCGATGCCTAGTAAATTTTAATAGGAAGAATAACAAGCTTGAAATGCATGACTTATTACGTGATATGGGAAGAGAAATCATTTGTGGAAGCCCACGAAAGGACCTCGAGGATCGCAGTAGATTGTGGTTTCAGGAGGATGGAACAAAAGTTATTGAGTGCCTATCCTTAAAGAAGCCCCATGAAGTATGTGAGATTGATGCTAAGGCATTCAAGGCAATGAGAAAACTCAGATTGCTCGAATTAGAGTATCAACCTCAGGCTAGTTTGGAAGAAGCCCCAGTTGTTGCGGTGTTTGACAATCCTCATTCTCAGTCACTCACCTTACTTGAGACAAACTCCTGA 1773 0.4033 MASSSSSSSSWTYDLFLSFRGEDTRDGFTSDLYSALGRSGIHAFMDDVDVERGEEISASLLQAIERSRIALVILSPDYASSRWCLDELVNIMECRKSAAQVVIPIFYNTDPSHVRKQTGTYGEAMKRHELRLGGGGDRQVLRWRQALTEISNLSGFDSGTFRSEVELLDTVVKDVLEKVDAGQLFVAERPVGIESQVRKLTSKLSKKTLTKALIIGLWGMGGVGKTTVAKAFYNTIGRTFRRARSFLAQIRENSKHSNDLVNLQEQLISDIINTEVFKIPNIDRGIKILQERLPHIKAFIVLDDVDSVNQLNALCGSLEWFCPGSIIVITTRDLHLLSVIRADHKYKMETMNEIESLELFSWHAFKQKAPLENFIELSKSVVAYCGGLPLALEVLGSYLFDREIEEWEDVLSKLERIPNDEIQAKLKISFDGLKDDMEKNIFLDICCFFINKDRNYATHILNGCGFKAKIGITTLIERCLVNFNRKNNKLEMHDLLRDMGREIICGSPRKDLEDRSRLWFQEDGTKVIECLSLKKPHEVCEIDAKAFKAMRKLRLLELEYQPQASLEEAPVVAVFDNPHSQSLTLLETNS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00041 590 Pfam NB-ARC domain 194 420 IPR002182 GO:0043531
Pral4792g00041 590 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 156 IPR035897 -
Pral4792g00041 590 Gene3D - 350 434 IPR042197 -
Pral4792g00041 590 ProSiteProfiles TIR domain profile. 11 179 IPR000157 GO:0007165
Pral4792g00041 590 PRINTS Disease resistance protein signature 385 399 - -
Pral4792g00041 590 PRINTS Disease resistance protein signature 214 229 - -
Pral4792g00041 590 PRINTS Disease resistance protein signature 292 306 - -
Pral4792g00041 590 PRINTS Disease resistance protein signature 548 564 - -
Pral4792g00041 590 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 181 - -
Pral4792g00041 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 445 IPR027417 -
Pral4792g00041 590 Gene3D - 9 179 IPR035897 -
Pral4792g00041 590 SMART till_3 12 153 IPR000157 GO:0007165
Pral4792g00041 590 SUPERFAMILY "Winged helix" DNA-binding domain 420 528 IPR036390 -
Pral4792g00041 590 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 574 IPR044974 GO:0006952
Pral4792g00041 590 Pfam TIR domain 13 192 IPR000157 GO:0007165
Pral4792g00041 590 Gene3D - 180 346 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00041 Pral-Chr4792 336733 339956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00041 8 558 WRKY Transcription Factor Family AT4G12020 27.986 1.64e-53 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00041 - - pcin:129287706 695.271