Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00040 ATGGTAGTTGCATATTGTGATGGACTTCCACTGGCTCTTGAAATCCTTGGCTCCTATTTGCGTGGGAGAACAATTAAACAATGGGAGAATGTGTTGTCCAAATTACAGAGGATTCTTACTAAAAGTATACATGAAAAGTTAAAAATAAGCTATGATGGATTGGATGATGATTCAGAGAAGGATATTTTCCTTGACATATGTTGCTTCTTTATCAACAAGGACAGGAACTATGTTACACAGATATTAGATGGTTGTGAACTTCATGCTGAAAATGGATTACAAATCCTCATAGAGCGGAGCTTGGTGAAAGTAGGTAGAAATAATAGGCTTGAAATGCATTATTTATTACAAGAAATGGGAAAAGAAATCATCCGTGGAAGCCCACCTAAAGATCCTAAGAAACATAGCAGACTATGGTCTCGAGAAGATGTGCTTGATGTGTTAACAGATCATACAGGAACCGAAGCTATTGAGGGTATATCTCTAAAGGTATCAAAAACCCATAGTGATCCCATTGATTCTGAGGCATTTAAGAAGATGAAGAAACTCAGATTGCGCCAACTAGACTATGTAAATCTTAAAGGAGATTATAAACATCTTTCTAAAAAGCTCAGGTGGGTTCGTTGGCATGGATTTCCATCAAATTACACTCCAACCAACATTTACCAAGAAAACCTAGTTGCTATTGACTTCAAACGTAGCAACCTCAAAGTAGTTTGGAAAGATTCCAAGAAGTTGCCAATGTTGAGGACACTAAATCTCAGTCATTCACCTTTCTTGACACAAACTCCTGATTTTACATATCTACCAAACCTTGAAAAGCTTATGATGAAAGATTGTGAGAGCTTGATTTTAATTCATGAGAGCATTGGGGATCTAAAATTTCTCCTTCATCTTAATCTAAAAGATTGCAAGAGCCTCAAAGATCTTCCTAGAAGCACCTACAAGTTGAAATCATTAAAGACTTTCATTATTTCTGGTTGTTCATTGATTGACCATTTAGAAGAAGATATTGAGCAAATGGAGTCCTTGACAAGTCTTATGGCAGATAACACTTCCATAACACAACTACCCAAGTCATTAGCAAGATTGGAAGGGCTTAAGCATGGATATGTATCTTTCCCTGGTCATGAAGGAAGAGGGCAAGATATATTTCCTTCTCTCATATGGTCTTGGATGTCACCTCATGATTTTCCTCAATCCGGTATTGAAGAATCCGTGCAAAGCGTATCATCTATAGTTGCCTCAATTGGACGGAATAGTGGGTTGCGTGGTCTATGTCAATTTCTAGGCGATCTTGTGAAGCTTCCAGTGCAAGGTCAGCAGATTCCGTCAATTCTCTTTCACTTCAACTAG 1356 0.3783 MVVAYCDGLPLALEILGSYLRGRTIKQWENVLSKLQRILTKSIHEKLKISYDGLDDDSEKDIFLDICCFFINKDRNYVTQILDGCELHAENGLQILIERSLVKVGRNNRLEMHYLLQEMGKEIIRGSPPKDPKKHSRLWSREDVLDVLTDHTGTEAIEGISLKVSKTHSDPIDSEAFKKMKKLRLRQLDYVNLKGDYKHLSKKLRWVRWHGFPSNYTPTNIYQENLVAIDFKRSNLKVVWKDSKKLPMLRTLNLSHSPFLTQTPDFTYLPNLEKLMMKDCESLILIHESIGDLKFLLHLNLKDCKSLKDLPRSTYKLKSLKTFIISGCSLIDHLEEDIEQMESLTSLMADNTSITQLPKSLARLEGLKHGYVSFPGHEGRGQDIFPSLIWSWMSPHDFPQSGIEESVQSVSSIVASIGRNSGLRGLCQFLGDLVKLPVQGQQIPSILFHFN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00040 451 Gene3D Ribonuclease Inhibitor 82 392 IPR032675 -
Pral4792g00040 451 SUPERFAMILY L domain-like 126 415 - -
Pral4792g00040 451 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 347 IPR044974 GO:0006952
Pral4792g00040 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 66 IPR027417 -
Pral4792g00040 451 SUPERFAMILY "Winged helix" DNA-binding domain 43 148 IPR036390 -
Pral4792g00040 451 Gene3D - 1 55 IPR042197 -
Pral4792g00040 451 PRINTS Disease resistance protein signature 6 20 - -
Pral4792g00040 451 PRINTS Disease resistance protein signature 244 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00040 Pral-Chr4792 300658 302530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00040 246 367 WRKY Transcription Factor Family AT4G12020 35.246 1.07e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00040 - - pcin:129289419 597.816